PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683186.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 342aa MW: 38409.5 Da PI: 8.4643

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683186.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.9	4.8e-25	77	120	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e XP_021683186.1 77 DPEPGRCRRTDGKKWRCSKEAFPDSKYCERHMHRGRNRSRKPVE 120 79***************************************986 PP
2	QLQ	62.5	1.1e-21	11	46	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FT++Q+q+L++Q+l+yKy+++++P+PpeL+ ++ XP_021683186.1 11 SPFTPTQWQELEHQALIYKYMVSGVPIPPELIYSVK 46 89*****************************87665 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MMNATNTRNR SPFTPTQWQE LEHQALIYKY MVSGVPIPPE LIYSVKRSLE SSLASRLFPH 60 QPIGWGCFQV GFGRKADPEP GRCRRTDGKK WRCSKEAFPD SKYCERHMHR GRNRSRKPVE 120 LASTTTSTTA TTTVINPSPS INRNLSTTSP FASSYSLSPL SSPTEPEFHV YQNPSHSSIL 180 NPFLYPHSSS SGTPGSGFSP QNSTTHNLFL DSGSSSHAEN DYRYFHGMRE GVDERAFFPE 240 ASGSARSLQD SYQQLAMSSY KGYSHLQFDS LADTSKQQQE DQQQHCFVLG TDFKSSATRP 300 IKLEKEGETQ KPLHHFFGEW PPKSADSWLD LAPSSRLHTA DS

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MMNATNTRNR SPFTPTQWQE LEHQALIYKY MVSGVPIPPE LIYSVKRSLE SSLASRLFPH  60
QPIGWGCFQV GFGRKADPEP GRCRRTDGKK WRCSKEAFPD SKYCERHMHR GRNRSRKPVE  120
LASTTTSTTA TTTVINPSPS INRNLSTTSP FASSYSLSPL SSPTEPEFHV YQNPSHSSIL  180
NPFLYPHSSS SGTPGSGFSP QNSTTHNLFL DSGSSSHAEN DYRYFHGMRE GVDERAFFPE  240
ASGSARSLQD SYQQLAMSSY KGYSHLQFDS LADTSKQQQE DQQQHCFVLG TDFKSSATRP  300
IKLEKEGETQ KPLHHFFGEW PPKSADSWLD LAPSSRLHTA DS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-67	GRF family protein