PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021683133.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 885aa    MW: 98279.5 Da    PI: 8.7211
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021683133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.21e-06177196525
                     --SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                     lC++fa+ G C++G+ C+F H
  XP_021683133.1 177 LCKDFAA-GRCRRGNHCQFLH 196
                     9******.************* PP

2zf-CCCH18.53.5e-06299319425
                     ---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                     ++C+ffa+ G C+ G  C+F+H
  XP_021683133.1 299 VPCKFFAA-GNCRNGKYCRFSH 319
                     69**9999.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 885 aa     Download sequence    
MTEIDAAFGK MSRSGRRRGS KWDLKEESRI PFDSVHDNAW PGEASLSFHE RESQHGWHSP  60
EGASGNRAKW SVREPLPGRR GSRRDDSIDE DPNKSLKPMP TWDGDENYGT RMSPGLDEWR  120
QQNRHSSPRN EWKRSRRGRS QSRSRSRSRS RSPVCGFGQE SGLCDRSRSR SGLSAQLCKD  180
FAAGRCRRGN HCQFLHQGTQ SYEDGWERHR KTVTSKYTTP HESREYSSGS GRSTDCCNVF  240
LKGDCRRVAC CRFSHHVASN AAAKGSSNEV IRQRNNDRRH RDASLERQGD RETFRAANVP  300
CKFFAAGNCR NGKYCRFSHQ DLAHGSPDRS QDGRHSLVRN TDDPEKLWNV PKWASTSASD  360
TGKLSGHKND TVVAPDQRGS TRSVDGGWGH CLEEDKTLGD RPVEHKMVKS ETALTWKAEN  420
ASDNMLASEQ RACGENWLGD MDMSPEWNYI VTHPKCIDKQ EPALTNCNAS ITQVSGHAHD  480
ATAVMPSLIN ESSAKHQDYN LREVVANALP RDDNSVTGKT ASSHASVYAN IMSAQSFDQN  540
GMNSNVLPLP CLNVVGQGQL TISSSGDNVN PQNQMLLQEG RTINKPDNGE ANASQVNSGV  600
SKTQKVSSEQ LTQLTNISSS LAQLLANGQQ LPHLSVHNNT EISSYANSVA LVKPDSAVTT  660
ESNQKVGLRK QYNPICDNIA PEKHVVNNNP PGFSPNLVRQ KNISDGKPEM PSKSFSPSVV  720
GPPNGGGYNQ YRSLQEPSSK SCQLNEMEPG SNSKVTKENN GAVTEESREL EEDKTAQEND  780
PLENIDGDDK TDEGRKSKDV KGIRAFKFAL VEFVKELLKP TWKEGQLSKD AYKNIVKKVV  840
DKVIGSMQGA SIPQTPEKIQ HYLSFSKPRL TKLVQAYVEK FQKDK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143151RSRSRSRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33835.12e-15C3H family protein