PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683052.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 562aa MW: 60588.5 Da PI: 6.0734

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	9.9e-09	378	426	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_021683052.1 378 NSHSLAERVRREKISERMKFLQDLVPGC----SKVIGKAVMLDEIINYVQSLQ 426 58***********************9....566***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MEMGDKDKFD LEKRSENHIN YHLPGSVPSD WRFSGANIAN SSLGLVSTDN QMPVCRGDLV 60 GTSCSSASMV DSFSPGVWDH PTNTQNLGFC DINVQHNAST INPIGIGKGG PASLRSGIDK 120 TLDIGWNPPS SQLKGGIFLP TTPGVLPQSL SQFPADSAFI ERAARFSCFN GGNFSDVVNP 180 LGIPEPMDLY SRGGGMMQVP HEVFAGSGLK SIPGGQGQKN VMNMGDSSKD ASLSVEHVAT 240 EGSPLKNERR SGSFVRSHDE AKQGGSGNES EETEFSGGGR QEEQSMLEGN GGELSAKSPG 300 LKKRKRNGQD ADPYQANGNQ QSIEAAKDNP EVQQKGDENP ASTPNKTAGK QGKQGSQASD 360 PPKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQD LVPGCSKVIG KAVMLDEIIN 420 YVQSLQRQVE FLSMKLATVN PRLDFNIEGL HTKDILHSRA VPSSNLAFSP EVPMVYPPFN 480 VSQPGLIQGS FPGMESHSEM LRRAINSQLT PLTGGFKEPT QLPNAWDYEL NNVVQMGYAT 540 SAPQDSQDIN GSLPPGHMKA EL

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MEMGDKDKFD LEKRSENHIN YHLPGSVPSD WRFSGANIAN SSLGLVSTDN QMPVCRGDLV  60
GTSCSSASMV DSFSPGVWDH PTNTQNLGFC DINVQHNAST INPIGIGKGG PASLRSGIDK  120
TLDIGWNPPS SQLKGGIFLP TTPGVLPQSL SQFPADSAFI ERAARFSCFN GGNFSDVVNP  180
LGIPEPMDLY SRGGGMMQVP HEVFAGSGLK SIPGGQGQKN VMNMGDSSKD ASLSVEHVAT  240
EGSPLKNERR SGSFVRSHDE AKQGGSGNES EETEFSGGGR QEEQSMLEGN GGELSAKSPG  300
LKKRKRNGQD ADPYQANGNQ QSIEAAKDNP EVQQKGDENP ASTPNKTAGK QGKQGSQASD  360
PPKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQD LVPGCSKVIG KAVMLDEIIN  420
YVQSLQRQVE FLSMKLATVN PRLDFNIEGL HTKDILHSRA VPSSNLAFSP EVPMVYPPFN  480
VSQPGLIQGS FPGMESHSEM LRRAINSQLT PLTGGFKEPT QLPNAWDYEL NNVVQMGYAT  540
SAPQDSQDIN GSLPPGHMKA EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-132	bHLH family protein