PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021682999.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HSF
Protein Properties Length: 516aa    MW: 56191.6 Da    PI: 4.5089
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021682999.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.34e-36441352102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d++++ ++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++
  XP_021682999.1  44 FLSKTYDMVDDPATDAIVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKS 129
                     9********************999*****************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i r+k 
  XP_021682999.1 130 ISRRKP 135
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
MDGTINNEGS GGGSGDASTS GTGGAQAPAA PEPISAQANA PPPFLSKTYD MVDDPATDAI  60
VSWSPTNNSF VVWNPPEFAR DLLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL  120
RGQKHLLKSI SRRKPAHGHA HQPVQKPHGQ NSSVGACVEV GKFGLEEEVE RLKRDKNVLM  180
QELVRLRQQQ QATDGQLQAM VQRLQGMEQR QQQMMSFLSK AMQSPGFLAQ FVQQQNESNR  240
RITEANKKRR LKQDGISENE NSSAPDGQIV KYKPLINEAA KAMLRQMMKM DACSGIESYN  300
NGLEVFLIGS GSPSSSGMES GRSSSHISEV TLQEVTPTTG DSTYVPAASG HDPAASISEI  360
KCTPCIPSSE KITASQLPDM SALVGSQEAP SISVPQSDVV MPTLSQIPEM VPESIVDIPG  420
EGYEEPETGN DGFMDLTLVG IENVPSDPDI DMLLENSSFW DELVQSPVLE DIESSSVDGE  480
AKGNDVQPMD SGWDKTQHMD QLAEQMGLLT SDAKKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1246253NKKRRLKQ
2247252KKRRLK
3247273KKRRLKQDGISENENSSAPDGQIVKYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-142HSF family protein