PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021682990.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 309aa    MW: 34508.4 Da    PI: 5.471
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021682990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.71.5e-141966148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l ++    G g+W+ +ar  g+ R++k+c++rw +yl
   XP_021682990.1 19 KGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 66
                     678*******************************************97 PP
2Myb_DNA-binding50.26.1e-1672115146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+el++ ++  lG++ W+ Ia++++ gRt++++k++w++
   XP_021682990.1  72 RGAFSPQEEELIIYLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 115
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MRKPDACGNY NNNNNKLRKG LWSPEEDDKL MNYMLNNGQG CWSDVARNAG LQRCGKSCRL  60
RWINYLRPDL KRGAFSPQEE ELIIYLHSIL GNRWSQIAAR LPGRTDNEIK NFWNSTIKKR  120
LKNMSSIASP NTSDSSSEPS KEVAAAAAIG GGFISMQEQG MGYIDPSLSS SSSSNTSMQA  180
MFLNRMMDSL PTFDHGLSMY GASVYFNNDA SPCMTQIVNT SDDDLYGNRG STKENAKTED  240
KAIYGNNTNK YMYSNVNRIN SSCNNNNQEA NMAAGIGNLW QGEDLKVGEW DLEELMKEVS  300
SFPFLDFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.19e-73MYB family protein