PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021682981.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 669aa    MW: 73387.5 Da    PI: 5.184
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021682981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.51.9e-07278298526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                     +C+++++ G C++Gd C F+Hg
  XP_021682981.1 278 PCPDHRK-GACRRGDLCEFSHG 298
                     8******.*************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 669 aa     Download sequence    
MDNSIGTVEA EHSFSVLLEY AADNDVEGFK RTVCDESEIM EVGLWYGHQR VLKRGVLEHR  60
TPLMVAAKYG SVEVLKLILS LPEVDVNFSC GPDQSTALHC AASGGSVNVI DAIKLLLLAG  120
ADPNSTDANG HRPIDVIVAS PNFPYLKFAL EKLLKNDGSA SQSDLQVSTN CLRSSLPSIS  180
LLSEEGSSFS ISGSILSPIT SKINDVHISS AKKEYHVDPS VPDITNSIYA TDEFRMFSFK  240
IQPCSRAYSH DWTECPFVHP GENARRRDPR RFHYSCVPCP DHRKGACRRG DLCEFSHGIF  300
ECWLHPAQYR TRLCKDGTSC IRRVCFFAHT SDELRPLYAS TGAAVPSPQA AAVDFTAALN  360
LLSGSPSAVS AVSPLSFTPP MSASRNDLRL SMAWPQQNIL NLKILSNNLQ ANRLRTSLNA  420
RDIPSEEFNG IQDFELQQLR LLNELSCISQ PYHNSSSANL KQLNASVLDR LLSYEVSSPQ  480
NIYQLGAAPV FFPSYKPAVL NEFQQQSMLS PIKTGVFSPK NVDYSPFQAS FDCSSPMKML  540
PQLNEPTSPL SSQLSTLARS EKLQLQLGSL SSQEIGSNLT YNGVNVDWSI REDEVGLLQK  600
LYSNGNCGEE PDVSWVQSVL KDSPSETEEK AISVSGSLDD SSSNPQSESS DHVACQAWLE  660
GLKLDQIVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12850.10.0C3H family protein