PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021682620.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 492aa MW: 54099.6 Da PI: 9.1527

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021682620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77	1.9e-24	222	266	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++++k+CErHl+rgr+rsrk +e XP_021682620.1 222 DPEPGRCRRTDGKKWRCSRDVVGDQKYCERHLNRGRHRSRKLVEG 266 79***************************************9985 PP
2	QLQ	54.3	4.2e-19	151	187	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q ++L+ Q+l++KyL+an+PvPpeLl +++k XP_021682620.1 151 GPFTPSQRMELEYQVLIFKYLSANVPVPPELLTPLKK 187 59*******************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MDSGIPSLDG FVASGSNQAA SQSQVSLIEA NNQKDQQVRL ARQERPSDAW RTISNYMPKG 60 TIDFSVPKTM LLNQGATLLT TADSMVHGDS HQPGQMLNFP SLRAEVASFL SKDDGFPHYQ 120 SPPSAYARTG AGYGGASLNA GMNGPSAFAK GPFTPSQRME LEYQVLIFKY LSANVPVPPE 180 LLTPLKKPLY PYPYGFSGGF YGPNSMGWGT LRHMGYMGSP VDPEPGRCRR TDGKKWRCSR 240 DVVGDQKYCE RHLNRGRHRS RKLVEGQTVL ATAQITNSKA MPATSSTSTL VISNGDASKK 300 FVNVITQRQS RILKTATAVN LESDESPFTV APKTIEEESP LSEFGNISAE SFISSSKRRR 360 YVNSRDSEPF LSFNEQETQD QHPLRQFIED WPKDQCSRSA ISWPEELKSD WTQLSMSTPM 420 YEKIALSPSM LSREFDPNRM GLGMSSDFNE LSKKQSNRVP ISRGTSTSGP LPEVVNSNSI 480 SNAGGSKSSL TP

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MDSGIPSLDG FVASGSNQAA SQSQVSLIEA NNQKDQQVRL ARQERPSDAW RTISNYMPKG  60
TIDFSVPKTM LLNQGATLLT TADSMVHGDS HQPGQMLNFP SLRAEVASFL SKDDGFPHYQ  120
SPPSAYARTG AGYGGASLNA GMNGPSAFAK GPFTPSQRME LEYQVLIFKY LSANVPVPPE  180
LLTPLKKPLY PYPYGFSGGF YGPNSMGWGT LRHMGYMGSP VDPEPGRCRR TDGKKWRCSR  240
DVVGDQKYCE RHLNRGRHRS RKLVEGQTVL ATAQITNSKA MPATSSTSTL VISNGDASKK  300
FVNVITQRQS RILKTATAVN LESDESPFTV APKTIEEESP LSEFGNISAE SFISSSKRRR  360
YVNSRDSEPF LSFNEQETQD QHPLRQFIED WPKDQCSRSA ISWPEELKSD WTQLSMSTPM  420
YEKIALSPSM LSREFDPNRM GLGMSSDFNE LSKKQSNRVP ISRGTSTSGP LPEVVNSNSI  480
SNAGGSKSSL TP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	2e-63	GRF family protein