PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021682592.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 436aa MW: 48424.2 Da PI: 5.2408

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021682592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.8e-17	89	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++vkq+G + W+ Ia+++ gR +kqc++rw+++l XP_021682592.1 89 KGQWTEEEDRKLIRLVKQFGVRKWAQIAEKLA-GRAGKQCRERWHNHL 135 799***************************.***********97 PP
2	Myb_DNA-binding	54.1	3.6e-17	141	183	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W++eE+ +lv+a+ + G++ W+ Ia+ ++ gRt++ +k++w+ XP_021682592.1 141 KESWSEEEEMILVEAHSKVGNR-WAEIAKLIP-GRTENAIKNHWN 183 578*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MVCIVLAFES MEREVLEKIC VGESGRSKLA LICSPESFSE INFDDGDSLN WTCEGNPNAA 60 LEGEVKASGG ISKGQGKKAK KVSCPTLIKG QWTEEEDRKL IRLVKQFGVR KWAQIAEKLA 120 GRAGKQCRER WHNHLRPDIK KESWSEEEEM ILVEAHSKVG NRWAEIAKLI PGRTENAIKN 180 HWNATKRRQN SRRKNKQTEN KIAKPHSSIL QDYIRSKNLK NPCATTVITS SHSTATAINT 240 PSSSTTSDDP SSQFNCILPE LSEPTVDDSP PLIPQTYDDE LLFLQNFFTN NSMEPSVEEV 300 GIKNLMEMET SSNVDHQLKN SSVVLDPLGL YQNNGDQQLA DASDQCDFFP SALTSPNMGP 360 NGLQSEERPT THLYSDLYLS YLLNGAAACS SSIDYGYGNS MNMELVIDQT CSNGKKEMDL 420 IEMVSSSHFS QGSNST

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MVCIVLAFES MEREVLEKIC VGESGRSKLA LICSPESFSE INFDDGDSLN WTCEGNPNAA  60
LEGEVKASGG ISKGQGKKAK KVSCPTLIKG QWTEEEDRKL IRLVKQFGVR KWAQIAEKLA  120
GRAGKQCRER WHNHLRPDIK KESWSEEEEM ILVEAHSKVG NRWAEIAKLI PGRTENAIKN  180
HWNATKRRQN SRRKNKQTEN KIAKPHSSIL QDYIRSKNLK NPCATTVITS SHSTATAINT  240
PSSSTTSDDP SSQFNCILPE LSEPTVDDSP PLIPQTYDDE LLFLQNFFTN NSMEPSVEEV  300
GIKNLMEMET SSNVDHQLKN SSVVLDPLGL YQNNGDQQLA DASDQCDFFP SALTSPNMGP  360
NGLQSEERPT THLYSDLYLS YLLNGAAACS SSIDYGYGNS MNMELVIDQT CSNGKKEMDL  420
IEMVSSSHFS QGSNST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11050.1	4e-65	MYB family protein