PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021682279.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family BBR-BPC
Protein Properties Length: 337aa    MW: 37490.3 Da    PI: 9.9035
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021682279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind390.82e-11913371301
       GAGA_bind   1 mdddgsre..rnkg.yye........pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnklla 83 
                     mdd g+re  r+k+ +++        +a +s+     +q+m+++aerda+i+ern+a+sekkaa+aerdmaflqrd+a+aern+a++erdn++++
  XP_021682279.1   1 MDDGGHREngRHKAdQHKtahgqwlmQAqPSM-----KQIMAIMAERDAAIHERNMAISEKKAAIAERDMAFLQRDSAIAERNNAMMERDNAIAT 90 
                     99999999899999888855544443222334.....5********************************************************* PP

       GAGA_bind  84 lllvensla....salpvgvqvlsgtksidslqqlse..pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkkse 172
                     l+++ensla    s++p+g+q+++g+k++++ qq+ +  p+ ++ ++++re++ +++ pi+   +ea ++++    +r+k++k+   +kk   ++
  XP_021682279.1  91 LQYRENSLAsgnmSSCPPGCQISRGVKHMHHPQQHPHhvPHSSEASYGTREMQASDTVPISPVGSEAAKSRRG---KRSKDAKVMPPNKK---TS 179
                     *******9999999********************55558999*****************98755554444433...34444444333333...33 PP

       GAGA_bind 173 kskkkvkkesader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCttt 238
                     ks +kvk+e++d +                             sk+++k +dl+ln++++Dest+P+PvCsCtG+ rqCYkWG+GGWqS+CCttt
  XP_021682279.1 180 KSPRKVKRENEDLNkimygkshewkngqdmategddlnkqlvaSKSDWKGQDLGLNQIAYDESTMPAPVCSCTGVFRQCYKWGSGGWQSSCCTTT 274
                     44444555554422355666678999********************************************************************* PP

       GAGA_bind 239 iSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     +SvyPLP+++++r+aR++grKmS++af+klL++LaaeGydlsnpvDLk+hWAkHGtn+++ti+
  XP_021682279.1 275 LSVYPLPAVPNKRHARVGGRKMSGSAFSKLLSRLAAEGYDLSNPVDLKEHWAKHGTNRYITIK 337
                     **************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MDDGGHRENG RHKADQHKTA HGQWLMQAQP SMKQIMAIMA ERDAAIHERN MAISEKKAAI  60
AERDMAFLQR DSAIAERNNA MMERDNAIAT LQYRENSLAS GNMSSCPPGC QISRGVKHMH  120
HPQQHPHHVP HSSEASYGTR EMQASDTVPI SPVGSEAAKS RRGKRSKDAK VMPPNKKTSK  180
SPRKVKRENE DLNKIMYGKS HEWKNGQDMA TEGDDLNKQL VASKSDWKGQ DLGLNQIAYD  240
ESTMPAPVCS CTGVFRQCYK WGSGGWQSSC CTTTLSVYPL PAVPNKRHAR VGGRKMSGSA  300
FSKLLSRLAA EGYDLSNPVD LKEHWAKHGT NRYITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-160BBR-BPC family protein