PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021681867.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 707aa MW: 78113.6 Da PI: 6.9383

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021681867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.5	2.6e-23	122	223	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + + XP_021681867.1 122 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGDTWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAE 212 89**************************996555555..89*******************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_021681867.1 213 NGDLCVGIRRA 223 8999**997 PP
2	Auxin_resp	114.1	1.3e-37	295	378	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++Fev+Y+Prast+eF+vk++ v++al+++++ GmRfkmafetedss++++ +Gt+++ + +dp+rWp+S+Wr+L+ XP_021681867.1 295 AATLAANGQPFEVFYYPRASTPEFCVKASLVKTALQIRWCSGMRFKMAFETEDSSRISWfMGTISSAQVADPLRWPDSPWRLLQ 378 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MITFMEAKER VKEVEKCLDS QLWHACAGGM IQMPMVNSKV FYFPQGHCEH ASGPMDFRNF 60 PRVPSYILCR VLAVKFMADP ETDEVYANMK LAPITSSEPG LEEEEERVIN GGEGQENKPA 120 SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TILAKDVHGD TWKFRHIYRG 180 TPRRHLLTTG WSTFVNHKKL VAGDSIVFLR AENGDLCVGI RRAKRGIGGG PESSWNPAGG 240 NCVMPYGGFS AFFREEENKL LRNGNGNSNG NGNGSRVNGF LMGKGKVRPE SVTEAATLAA 300 NGQPFEVFYY PRASTPEFCV KASLVKTALQ IRWCSGMRFK MAFETEDSSR ISWFMGTISS 360 AQVADPLRWP DSPWRLLQVT WDEPDLLQNV KRVSPWLVEL VSNMPAIHLS PFSPPRKKLR 420 FPQHPDFPLD GQFPIPSFSG NLLGPSNPFS CLPDSSPAGM QGARHAHYGL PLSDLHLSKL 480 QTGLLPAGFP PLLDHAATHT RISNSPIIQK PSMSENVSCV LTMAHSTQIS KKTDDVKTPQ 540 LVLFGQPILT EQQISLSCSG DTLSPVHTGN SSSKGNLDKM TNFSDGSGSA LHQQSLSERS 600 SCEGFQWHKN NPQENEPSLE IGHCKVFMEL EDVGRTLDLS LLSSYEELNK KLADMFKIEN 660 SETLNNVLYR DVTGAVKHIG CEPFSDFMKT ARRLTILMDS SSDNVGL

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MITFMEAKER VKEVEKCLDS QLWHACAGGM IQMPMVNSKV FYFPQGHCEH ASGPMDFRNF  60
PRVPSYILCR VLAVKFMADP ETDEVYANMK LAPITSSEPG LEEEEERVIN GGEGQENKPA  120
SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TILAKDVHGD TWKFRHIYRG  180
TPRRHLLTTG WSTFVNHKKL VAGDSIVFLR AENGDLCVGI RRAKRGIGGG PESSWNPAGG  240
NCVMPYGGFS AFFREEENKL LRNGNGNSNG NGNGSRVNGF LMGKGKVRPE SVTEAATLAA  300
NGQPFEVFYY PRASTPEFCV KASLVKTALQ IRWCSGMRFK MAFETEDSSR ISWFMGTISS  360
AQVADPLRWP DSPWRLLQVT WDEPDLLQNV KRVSPWLVEL VSNMPAIHLS PFSPPRKKLR  420
FPQHPDFPLD GQFPIPSFSG NLLGPSNPFS CLPDSSPAGM QGARHAHYGL PLSDLHLSKL  480
QTGLLPAGFP PLLDHAATHT RISNSPIIQK PSMSENVSCV LTMAHSTQIS KKTDDVKTPQ  540
LVLFGQPILT EQQISLSCSG DTLSPVHTGN SSSKGNLDKM TNFSDGSGSA LHQQSLSERS  600
SCEGFQWHKN NPQENEPSLE IGHCKVFMEL EDVGRTLDLS LLSSYEELNK KLADMFKIEN  660
SETLNNVLYR DVTGAVKHIG CEPFSDFMKT ARRLTILMDS SSDNVGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein