PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021681866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 707aa MW: 78113.6 Da PI: 6.9383 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 73.5 | 2.6e-23 | 122 | 223 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + + XP_021681866.1 122 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGDTWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAE 212 89****************************996555555..89***********************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_021681866.1 213 NGDLCVGIRRA 223 8999****997 PP | |||||||
2 | Auxin_resp | 114.1 | 1.3e-37 | 295 | 378 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++Fev+Y+Prast+eF+vk++ v++al+++++ GmRfkmafetedss++++ +Gt+++ + +dp+rWp+S+Wr+L+ XP_021681866.1 295 AATLAANGQPFEVFYYPRASTPEFCVKASLVKTALQIRWCSGMRFKMAFETEDSSRISWfMGTISSAQVADPLRWPDSPWRLLQ 378 68899*****************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 707 aa Download sequence |
MITFMEAKER VKEVEKCLDS QLWHACAGGM IQMPMVNSKV FYFPQGHCEH ASGPMDFRNF 60 PRVPSYILCR VLAVKFMADP ETDEVYANMK LAPITSSEPG LEEEEERVIN GGEGQENKPA 120 SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TILAKDVHGD TWKFRHIYRG 180 TPRRHLLTTG WSTFVNHKKL VAGDSIVFLR AENGDLCVGI RRAKRGIGGG PESSWNPAGG 240 NCVMPYGGFS AFFREEENKL LRNGNGNSNG NGNGSRVNGF LMGKGKVRPE SVTEAATLAA 300 NGQPFEVFYY PRASTPEFCV KASLVKTALQ IRWCSGMRFK MAFETEDSSR ISWFMGTISS 360 AQVADPLRWP DSPWRLLQVT WDEPDLLQNV KRVSPWLVEL VSNMPAIHLS PFSPPRKKLR 420 FPQHPDFPLD GQFPIPSFSG NLLGPSNPFS CLPDSSPAGM QGARHAHYGL PLSDLHLSKL 480 QTGLLPAGFP PLLDHAATHT RISNSPIIQK PSMSENVSCV LTMAHSTQIS KKTDDVKTPQ 540 LVLFGQPILT EQQISLSCSG DTLSPVHTGN SSSKGNLDKM TNFSDGSGSA LHQQSLSERS 600 SCEGFQWHKN NPQENEPSLE IGHCKVFMEL EDVGRTLDLS LLSSYEELNK KLADMFKIEN 660 SETLNNVLYR DVTGAVKHIG CEPFSDFMKT ARRLTILMDS SSDNVGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30080.1 | 0.0 | ARF family protein |