PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021681831.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 413aa MW: 47024.1 Da PI: 5.6105

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021681831.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.5	1.8e-11	208	259	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r+ah ++Er+RR+++N+ + Lr+l+P + ++ + a+i A+e++++L+ XP_021681831.1 208 QRMAHIAVERNRRKQMNEHLRVLRSLMPGS---CVQRGDHASIIGGAIEFVRELE 259 79*************************6...599*************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MDKEDNYSVT FTGLDYSLNH HHHHQQQDHE LIKSRIGEGS GDSSNGMIDY MLNNPHPHQQ 60 QLSYEFCIST SLDKLSFADV MQFSDFGPKL ALNQTKISEV ETGIDPVYFL KFPVLNDKRE 120 GQSLMVPQLG GENEERFKGG SSVENKAGFV REDRVVREEV EARISDNTSV QLQLLGDQDL 180 QNKNPIPEAK NKRKRPRTIK TSEEVESQRM AHIAVERNRR KQMNEHLRVL RSLMPGSCVQ 240 RGDHASIIGG AIEFVRELEQ LLQCLESQKR RRLYGEASRQ MGDSSLAIQQ PQPPLFPPLP 300 LPDDHMKLVD FETELREETA ENKSCLADVE VKLLGFDAMI KILSRRRPGQ LINTIAALED 360 LELNILHINI TTIEQTVLYS FNVKIESESR FTAEDIASSV QQIFNFIHAN SSM

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MDKEDNYSVT FTGLDYSLNH HHHHQQQDHE LIKSRIGEGS GDSSNGMIDY MLNNPHPHQQ  60
QLSYEFCIST SLDKLSFADV MQFSDFGPKL ALNQTKISEV ETGIDPVYFL KFPVLNDKRE  120
GQSLMVPQLG GENEERFKGG SSVENKAGFV REDRVVREEV EARISDNTSV QLQLLGDQDL  180
QNKNPIPEAK NKRKRPRTIK TSEEVESQRM AHIAVERNRR KQMNEHLRVL RSLMPGSCVQ  240
RGDHASIIGG AIEFVRELEQ LLQCLESQKR RRLYGEASRQ MGDSSLAIQQ PQPPLFPPLP  300
LPDDHMKLVD FETELREETA ENKSCLADVE VKLLGFDAMI KILSRRRPGQ LINTIAALED  360
LELNILHINI TTIEQTVLYS FNVKIESESR FTAEDIASSV QQIFNFIHAN SSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	209	220	RMAHIAVERNRR
2	269	273	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-126	bHLH family protein