PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021681786.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 440aa MW: 48542.9 Da PI: 8.115

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021681786.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.2	6e-08	351	391	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L XP_021681786.1 351 ARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 391 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MDSLWWDDSQ VLTNTSSLWN NPQHASPLWS NQENEESLIA SNSNSCLFGG KMDRTEDIFN 60 QFQELQKLQE TTRIVANTVV AKSGADVRWG DTSTLELYSS PSINKPYATT NPTITGFGMS 120 NQSRIINGLP NEKAAGVSTA GSLESLDCLL SATNSNTNTS VEDDGISMIF SDCRNLWNYG 180 ANSAASSGES ENNTSNARNK EMHCRVGKLD ETVSQSSSDK KSSPTKPDSI KRSNNQSELK 240 VGASNKYPYF DLLQNDCSTS GGRFRLISEN PPKPKRFRLD KRPGSSNINF QQPSSSVSSS 300 IEEVDPEAIA QMKEMIYRAA AFRPVNLGLE VVEKPKRKNV RISSDPQTVA ARQRRERISE 360 RIRVLQRLVP GGSKMDTASM LDEAANYLKF LRSQVKALEN LGHKLDSVNC PPTSVAFSSL 420 PFNNHSFFSH ANSSLFTPKP

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MDSLWWDDSQ VLTNTSSLWN NPQHASPLWS NQENEESLIA SNSNSCLFGG KMDRTEDIFN  60
QFQELQKLQE TTRIVANTVV AKSGADVRWG DTSTLELYSS PSINKPYATT NPTITGFGMS  120
NQSRIINGLP NEKAAGVSTA GSLESLDCLL SATNSNTNTS VEDDGISMIF SDCRNLWNYG  180
ANSAASSGES ENNTSNARNK EMHCRVGKLD ETVSQSSSDK KSSPTKPDSI KRSNNQSELK  240
VGASNKYPYF DLLQNDCSTS GGRFRLISEN PPKPKRFRLD KRPGSSNINF QQPSSSVSSS  300
IEEVDPEAIA QMKEMIYRAA AFRPVNLGLE VVEKPKRKNV RISSDPQTVA ARQRRERISE  360
RIRVLQRLVP GGSKMDTASM LDEAANYLKF LRSQVKALEN LGHKLDSVNC PPTSVAFSSL  420
PFNNHSFFSH ANSSLFTPKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	352	357	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	1e-55	bHLH family protein