PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021681483.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 693aa MW: 77873.2 Da PI: 6.7513

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021681483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.3	5.9e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd++++g +++ k++aee+ + + +++l ++d++g +W +++ yr++++r++lt+GW++Fv +++L +gD ++F + + XP_021681483.1 121 FSKKLTSSDTSTHGGFSVLKRHAEEClppldmsQ--DTPEQKLLVKDLHGSEWFFRHVYRGQPKRHLLTTGWSSFVTSKKLVAGDAFIFLR--GE 211 88***************************743..334458**********************************************4..37 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++e++++v+r+ XP_021681483.1 212 NAEFRIGVRRA 222 77779999985 PP
2	Auxin_resp	99.1	6.1e-33	247	332	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl...sGtvvgvsdldpvrWpnSkWrsLk 83 a ha++t+++F+v+Y+P++s++eF+v+++++ k+ ++ +svG+Rf+m fe+e+++e+r+ Gt+vg +d+d +rWpnS+WrsLk XP_021681483.1 247 AFHAINTGTMFTVYYRPWTSPTEFIVPFDQYIKSAEIDYSVGTRFRMLFEGEECPEQRIerfEGTIVGNEDFDHIRWPNSEWRSLK 332 679***************************************************9988779*******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
FALYVSFLGN KDDLYTELWH SCAGPLVYVP RAGEKVVYFP QGHMEQVEAY MNQDGTMEMP 60 IYNLPSMIIC KVVYVQLKAE AATDEVFAQI TLLPEPRQDG LSSKDGGNSQ PLPRKTYALS 120 FSKKLTSSDT STHGGFSVLK RHAEECLPPL DMSQDTPEQK LLVKDLHGSE WFFRHVYRGQ 180 PKRHLLTTGW SSFVTSKKLV AGDAFIFLRG ENAEFRIGVR RALKLQNNVS TTVISAHSMQ 240 HGILATAFHA INTGTMFTVY YRPWTSPTEF IVPFDQYIKS AEIDYSVGTR FRMLFEGEEC 300 PEQRIERFEG TIVGNEDFDH IRWPNSEWRS LKVKWDPTSD GFARPERVSP WNIEPIEPVK 360 RKRIYLQPPS KRSRLMDASV FPSMVKDGLL HSPVEYAAQN PSEVFQGQEK RDTGVDELGA 420 LEPPLISRLI PQNLNSNNKP VGLGNQLHFS VHGPFYPSPS GTVLFPGGNV VRLGLPNCCC 480 PLLSSYGVPE NTTRSRDLSV LRVKSYNSAP QDLRTSELKE ANEVPHAPQP SGGGRYMLFG 540 VDLVKSPQEL PSPQVATYSD HESLYSIPPM SQSSVSKPSK STSGSKSENQ CKNCCSAANQ 600 YCTKVLKYGA AGRSVDLTRF DGYEDLICEL DQMFDFKGSL IDGSSGWQVT YTDHEEDMML 660 IGDYPWQEFQ RMVRRLFICP KEDTGRLNPK SAN

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

FALYVSFLGN KDDLYTELWH SCAGPLVYVP RAGEKVVYFP QGHMEQVEAY MNQDGTMEMP  60
IYNLPSMIIC KVVYVQLKAE AATDEVFAQI TLLPEPRQDG LSSKDGGNSQ PLPRKTYALS  120
FSKKLTSSDT STHGGFSVLK RHAEECLPPL DMSQDTPEQK LLVKDLHGSE WFFRHVYRGQ  180
PKRHLLTTGW SSFVTSKKLV AGDAFIFLRG ENAEFRIGVR RALKLQNNVS TTVISAHSMQ  240
HGILATAFHA INTGTMFTVY YRPWTSPTEF IVPFDQYIKS AEIDYSVGTR FRMLFEGEEC  300
PEQRIERFEG TIVGNEDFDH IRWPNSEWRS LKVKWDPTSD GFARPERVSP WNIEPIEPVK  360
RKRIYLQPPS KRSRLMDASV FPSMVKDGLL HSPVEYAAQN PSEVFQGQEK RDTGVDELGA  420
LEPPLISRLI PQNLNSNNKP VGLGNQLHFS VHGPFYPSPS GTVLFPGGNV VRLGLPNCCC  480
PLLSSYGVPE NTTRSRDLSV LRVKSYNSAP QDLRTSELKE ANEVPHAPQP SGGGRYMLFG  540
VDLVKSPQEL PSPQVATYSD HESLYSIPPM SQSSVSKPSK STSGSKSENQ CKNCCSAANQ  600
YCTKVLKYGA AGRSVDLTRF DGYEDLICEL DQMFDFKGSL IDGSSGWQVT YTDHEEDMML  660
IGDYPWQEFQ RMVRRLFICP KEDTGRLNPK SAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62000.3	1e-159	ARF family protein