PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021681468.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 196aa MW: 21374.2 Da PI: 5.1995 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 135.9 | 1.5e-42 | 34 | 133 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q ++l+a+la XP_021681468.1 34 PCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQANELQAQLA 128 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_021681468.1 129 KAQAE 133 *9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MDHTEAANSN NNSTSPSSSS SPPPPLPPAV VLSPCAACKI LRRRCAEKCV LAPYFPPTEP 60 AKFTIAHRVF GASNIIKFLQ ELPESQRADA VSSMVYEASA RIRDPVYGCA GAICHLQKQA 120 NELQAQLAKA QAELVNMQCQ QANLMALLCM EMAQSPQQSS EQSVDNFIST PQSYQSNPGF 180 LEDNNNFGSL WEPLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 4e-61 | LBD family protein |