PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021681454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C2H2 | ||||||||
Protein Properties | Length: 440aa MW: 49170.1 Da PI: 9.5396 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.4 | 2.6e-05 | 206 | 228 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg+ F +nL+ H+ + H XP_021681454.1 206 SCPECGEIFVKAENLELHQAVrH 228 8******************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 440 aa Download sequence |
MAKPKPPIKP IKEIHQNQNQ HPQKSEKPPS WFVVRSLFTC KDQQRQQQQQ QQQELKQQRQ 60 PQQEKQEQQK KKEKKHHQHQ EQALEEITSK KCKKIKCSGS LCSNTKVMHR PETASPEVLK 120 RRASMGLSSS NDTSSRSMKV PLNEINGVPS STNSSVSLSS NSSINNVGSF RGMPFRRLSG 180 CYECRMVVDP VLGFTRDPSL RSSICSCPEC GEIFVKAENL ELHQAVRHAV SELGPEDTSK 240 NIVEIIFQSS WLKKQAPICQ IDRILKVHNT QRTISKFEEY RDSIKAKATK FPKKHPRCIA 300 DGNELLRFYC TSFACSLGLN GSSNLCNSIP RCNVCSIIKN GFKESSSTEG VNGNGILTTA 360 TSGKAHDKAA ILEESNGNSD KRAMLVCRVI AGRVKKSVEG NMEEYDSLAG AVGVYSNLDE 420 LYVFNARAIL PCFVVIYSGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75710.1 | 1e-102 | C2H2 family protein |