PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021681374.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 609aa MW: 65727.9 Da PI: 8.6227

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021681374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.6	2.6e-24	223	267	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_021681374.1 223 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRKPVEG 267 79****************************************985 PP
2	QLQ	62.6	1e-21	153	189	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+P+P++Ll +i+k XP_021681374.1 153 GPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRK 189 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MDFGVVGLEG FVGSDTSSSC FASLATSDPE IKQKWYGSGV LKQERSGTTS EDDCRSSKLS 60 KTESMLLPQR NTLLKSNTTT STTTTLFPDG HQHQQMLSFS RPKSEALSVE RSTQNATLPY 120 FQLTSSAYNR NTGYNYGSFN SANMHGVLAE ARGPFTPSQW MELEHQALIY KYITANVPIP 180 SNLLIPIRKA LDSAGFSNFS GGLLRPNTLT WGNFHLGFSN NTDPEPGRCR RTDGKKWRCS 240 RDAVADQKYC ERHINRGRHR SRKPVEGQSG HSAAAATSTT AASSSSSISA AVVGLRGGGG 300 GTSNSLAIAQ QQQRKNLQSD SLSNLSAVTP LSRMFLDKEK LGERLQDSPR LSMLSSNVDL 360 KSKENPFFIS KESSQIEFGL VNSDSLLNPS QNSSSLISCR NLGSSQDITD RETAGQHSVR 420 QFMDDWPKSQ SDRSAVSWPQ LDGQSDRTQL SISIPIAHTD YMSSTSSPNN EKVTLSPLRL 480 SHGLNPIQMG LGVGSVLNEQ NRRQANWIPI SWESSMGGPL GEVLHSTNSS VSECKSSSVL 540 NLMTEGWVCS PQVGSSPTGV LQKTSFASLS NSSAGSSPRA ENNKASEGAS LCNNLLGSTL 600 VHSSSLPAL

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MDFGVVGLEG FVGSDTSSSC FASLATSDPE IKQKWYGSGV LKQERSGTTS EDDCRSSKLS  60
KTESMLLPQR NTLLKSNTTT STTTTLFPDG HQHQQMLSFS RPKSEALSVE RSTQNATLPY  120
FQLTSSAYNR NTGYNYGSFN SANMHGVLAE ARGPFTPSQW MELEHQALIY KYITANVPIP  180
SNLLIPIRKA LDSAGFSNFS GGLLRPNTLT WGNFHLGFSN NTDPEPGRCR RTDGKKWRCS  240
RDAVADQKYC ERHINRGRHR SRKPVEGQSG HSAAAATSTT AASSSSSISA AVVGLRGGGG  300
GTSNSLAIAQ QQQRKNLQSD SLSNLSAVTP LSRMFLDKEK LGERLQDSPR LSMLSSNVDL  360
KSKENPFFIS KESSQIEFGL VNSDSLLNPS QNSSSLISCR NLGSSQDITD RETAGQHSVR  420
QFMDDWPKSQ SDRSAVSWPQ LDGQSDRTQL SISIPIAHTD YMSSTSSPNN EKVTLSPLRL  480
SHGLNPIQMG LGVGSVLNEQ NRRQANWIPI SWESSMGGPL GEVLHSTNSS VSECKSSSVL  540
NLMTEGWVCS PQVGSSPTGV LQKTSFASLS NSSAGSSPRA ENNKASEGAS LCNNLLGSTL  600
VHSSSLPAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	4e-92	GRF family protein