PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021681357.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 597aa MW: 66016.3 Da PI: 6.6395

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021681357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.1	3.3e-16	239	298	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021681357.1 239 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 298 78*****************988886678446***********************98 PP
2	AP2	45.8	1.5e-14	343	392	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_021681357.1 343 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 392 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MPLKSDGSLC IMEALTRSQP EGMVPSSSPK LEDFLGGATM ETQHYGSHER ETMALSLDSM 60 YYHQNTEPET NRQTSVELHE PYRHQGQQFP VQTHPYYSGI ACHGMYQTSL EEATKDAQLT 120 DCDSQIPQMA DDGMPCLKSW VDRQYSTHNA LEQQLNSTMV DDGGATGSIG PMGCGDLQSL 180 SLSMSPGSQS SCVTAPRQIS SPTGTECMAM ETKKRGPAKV GQKQPVHRKS IDTFGQRTSQ 240 YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK GRQVYLGGYD MEEKAARAYD LAALKYWGPS 300 THINFPLENY QEELEEMKNM SRQEYVAHLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG 360 RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVNAVTNFD ITRYDVERIM ASNTLLAGDL 420 ARRNKETETS NGAIEYNAPA QNGGEAIQLP NSHANGSDWK VVLYDSPQQP QPNACVDSLD 480 QNSISVGNYR SSSFSMAMQD IIGIDSVNSS QPMVDESATR LGTHSSNTSS LVTSLSSSRE 540 ASPDKTGTTM LFAKPPLASK FVTPTNGVNP WFQTAVQLRP AAISMSHLPV FAAWNDT

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MPLKSDGSLC IMEALTRSQP EGMVPSSSPK LEDFLGGATM ETQHYGSHER ETMALSLDSM  60
YYHQNTEPET NRQTSVELHE PYRHQGQQFP VQTHPYYSGI ACHGMYQTSL EEATKDAQLT  120
DCDSQIPQMA DDGMPCLKSW VDRQYSTHNA LEQQLNSTMV DDGGATGSIG PMGCGDLQSL  180
SLSMSPGSQS SCVTAPRQIS SPTGTECMAM ETKKRGPAKV GQKQPVHRKS IDTFGQRTSQ  240
YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK GRQVYLGGYD MEEKAARAYD LAALKYWGPS  300
THINFPLENY QEELEEMKNM SRQEYVAHLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG  360
RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVNAVTNFD ITRYDVERIM ASNTLLAGDL  420
ARRNKETETS NGAIEYNAPA QNGGEAIQLP NSHANGSDWK VVLYDSPQQP QPNACVDSLD  480
QNSISVGNYR SSSFSMAMQD IIGIDSVNSS QPMVDESATR LGTHSSNTSS LVTSLSSSRE  540
ASPDKTGTTM LFAKPPLASK FVTPTNGVNP WFQTAVQLRP AAISMSHLPV FAAWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-133	AP2 family protein