PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021681216.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 395aa    MW: 44239.6 Da    PI: 8.0978
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021681216.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.41.2e-08135155526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+ f+r G C++Gd+C FaHg
  XP_021681216.1 135 VCPEFRR-GACSRGDTCDFAHG 155
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MSTICADQHK LYHSHQLFSS SSSKKPFKDL DIPPRKLLLG KKTLQESPDI MSPCYKSNLQ  60
KFLPFNDATN GDHDHGKVSN EDLDPYSSDH FRMYEFKVRR CNRSRSHDWT DCPFAHPGEK  120
ARRRDPRKYH YSGTVCPEFR RGACSRGDTC DFAHGVFECW LHPSRYRTEA CKDGKNCKRK  180
VCFFAHSPHQ LRILPEVSCD ADKYDKSLVL PCSSLNHGHC CCLACHSMIS SPTSTLLGMS  240
HLSPPLSPSL SPPLSPGKQQ SINGFSPISR YSDRLSKLRS GLMSYKDVFT ELMTSLEAMN  300
VNNEAAASGS SSISFSAASN RSTNTPWMDS SFNGEDHHHQ QLILSPSTPN PRGSRNFFSG  360
DCSSKGFNID EKINNNDDKN GGADPDLGWV NELLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.15e-77C3H family protein