PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021681200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | SBP | ||||||||
Protein Properties | Length: 195aa MW: 21680.6 Da PI: 10.0336 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 134.7 | 2.9e-42 | 72 | 149 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+++C+adlseak yh+rhkvCe h+ka+ vlv+g++qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk++a XP_021681200.1 72 CCQADNCTADLSEAKPYHKRHKVCENHAKAQIVLVAGIRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKNAA 149 6**************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MDGKGKQPMV GKVVKKELAE LGWESSDNEG YLKMGYVENG VESNKKKKVV AGDDGGGGGK 60 KDGGSLSAGM RCCQADNCTA DLSEAKPYHK RHKVCENHAK AQIVLVAGIR QRFCQQCSRF 120 HELSEFDETK RSCRRRLAGH NERRRKNAAE SHTKGSSHKG TGTQLKDMVC GQVDDRGRIK 180 ITIRENATYK HFQIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 7e-46 | SBP family protein |