PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021680999.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 736aa MW: 81841.3 Da PI: 7.668

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021680999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	65.4	1.2e-20	641	724	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev++Li++r ++++r++ k +++lWee s+++ ++g+ rsp qCk+ w +l ++y+ ++e+ +++ +s++ +pyf++++ XP_021680999.1 641 KWKTEEVKKLIKMRGDLHDRFNVVKGRMALWEELSNNLIAEGVDRSPGQCKSLWASLVQKYEYEQESTSDN--KSREGWPYFEDMD 724 7******************************************************************95..66667*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MDTKITLVIP ALDSRTPIYA SSFTMELIKK RLKENGIFVY SRLKVFRTRK KFIAGPFEVE 60 PIRVTHSIPD CCGLVLRCDD GTILHTGDWK IDESPLDGKV FDREALEELS KEGVTLMMSD 120 STNVLSPGRT ISESVVADAL TRRISAAKGR VITTQFASNI HRLGSVKAAA DLTGRKLAFV 180 GMSLRTYLDA AWKDGKAPID PSTLVKVEDI DAYAPKDLLI VTTGSQAEPR AALNLASYGS 240 SHSFKLSKDD VILYSAKVIP GNESRVMKML NRISEIGSTI VMGKNELLHT SGHGYRGELE 300 EILRIVKPQH FLPIHGELLF LKEHESLGKS TGIRHTTVIK NGEMLGVSHL RNRRVISNGF 360 ISLGKENLQL MYSDGDKAFG TSTELCIDER LRIATDGIIV VSMEILRPQN AESLIENTIK 420 GKIRITTRCL WLDKGKLLDA LHKAAHAALS SCPVNCPLSH MEKTVSEVLR KMVRKYSGKR 480 PEVIAIAMEN PDGVLSDEIK TRLSGSSHVG VGISALKKVV DGYPKRNRSN KMQAESNGYM 540 HLDYTSQQNM EVDDIEVGRL PPNEETTTTT SNLADGVPSG SEDEDDFWKS FISSSSPTDD 600 SVQQHEHVNE LKEDGNMSSD DDSLAMQSSR SKPSKKVKRN KWKTEEVKKL IKMRGDLHDR 660 FNVVKGRMAL WEELSNNLIA EGVDRSPGQC KSLWASLVQK YEYEQESTSD NKSREGWPYF 720 EDMDKIFSGF EATSAK

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MDTKITLVIP ALDSRTPIYA SSFTMELIKK RLKENGIFVY SRLKVFRTRK KFIAGPFEVE  60
PIRVTHSIPD CCGLVLRCDD GTILHTGDWK IDESPLDGKV FDREALEELS KEGVTLMMSD  120
STNVLSPGRT ISESVVADAL TRRISAAKGR VITTQFASNI HRLGSVKAAA DLTGRKLAFV  180
GMSLRTYLDA AWKDGKAPID PSTLVKVEDI DAYAPKDLLI VTTGSQAEPR AALNLASYGS  240
SHSFKLSKDD VILYSAKVIP GNESRVMKML NRISEIGSTI VMGKNELLHT SGHGYRGELE  300
EILRIVKPQH FLPIHGELLF LKEHESLGKS TGIRHTTVIK NGEMLGVSHL RNRRVISNGF  360
ISLGKENLQL MYSDGDKAFG TSTELCIDER LRIATDGIIV VSMEILRPQN AESLIENTIK  420
GKIRITTRCL WLDKGKLLDA LHKAAHAALS SCPVNCPLSH MEKTVSEVLR KMVRKYSGKR  480
PEVIAIAMEN PDGVLSDEIK TRLSGSSHVG VGISALKKVV DGYPKRNRSN KMQAESNGYM  540
HLDYTSQQNM EVDDIEVGRL PPNEETTTTT SNLADGVPSG SEDEDDFWKS FISSSSPTDD  600
SVQQHEHVNE LKEDGNMSSD DDSLAMQSSR SKPSKKVKRN KWKTEEVKKL IKMRGDLHDR  660
FNVVKGRMAL WEELSNNLIA EGVDRSPGQC KSLWASLVQK YEYEQESTSD NKSREGWPYF  720
EDMDKIFSGF EATSAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein