PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021680962.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 396aa MW: 43487.8 Da PI: 5.6046

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021680962.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	40.3	9.7e-13	16	115	10	127
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104 t+eel L+k + g + ++ +vi++v+ y++ P++Lp+ wy +++k a++ g Wk +g+ +++ +++ +g ++ XP_021680962.1 16 TNEELF-ISLEKMMGGYPPPA-NVITDVNPYNYAPSNLPA------GIWYLIRSKEK---------GAMEVGSWKVKGEACKLFW-NSSITGWRT 92 567777.45888888888888.99************92......23665544433.........25678*********9.999** PP NAM 105 tLvfykgrapkgektdWvmheyr 127 tL +++g+ p+ +ktdWvm+ey XP_021680962.1 93 TLEYFEGQVPHERKTDWVMQEYW 115 ********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MHPPIAPVPE IAVDFTNEEL FISLEKMMGG YPPPANVITD VNPYNYAPSN LPAGIWYLIR 60 SKEKGAMEVG SWKVKGEACK LFWNSSITGW RTTLEYFEGQ VPHERKTDWV MQEYWIMGPV 120 ENSKEASSLC RVFLSGEQGP DHKKQQKKSS LHIACEILIH STQATVKKAH VDASSGSTSR 180 PEVDGHAETG NLAVAGEPPF NLVENPPEID YISRGDFLEL LDLDNPASSS SSSDDSSCLT 240 SSSDECFDSL ALLQQLDSEI NQHSLQKNES CKLSLQKNES CKLSVSASCR PNEVVMAPAS 300 PAGSFVRVEE NKPPTEEILG TNPSLLPILA NGSKDLDNRV LQHAVRSHNA GYMDEGPSNS 360 HDVGASSSRL GPSRDGERKV AKVRTKKHKK YLCFLF

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MHPPIAPVPE IAVDFTNEEL FISLEKMMGG YPPPANVITD VNPYNYAPSN LPAGIWYLIR  60
SKEKGAMEVG SWKVKGEACK LFWNSSITGW RTTLEYFEGQ VPHERKTDWV MQEYWIMGPV  120
ENSKEASSLC RVFLSGEQGP DHKKQQKKSS LHIACEILIH STQATVKKAH VDASSGSTSR  180
PEVDGHAETG NLAVAGEPPF NLVENPPEID YISRGDFLEL LDLDNPASSS SSSDDSSCLT  240
SSSDECFDSL ALLQQLDSEI NQHSLQKNES CKLSLQKNES CKLSVSASCR PNEVVMAPAS  300
PAGSFVRVEE NKPPTEEILG TNPSLLPILA NGSKDLDNRV LQHAVRSHNA GYMDEGPSNS  360
HDVGASSSRL GPSRDGERKV AKVRTKKHKK YLCFLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-13	NAC family protein