PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021680889.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 627aa MW: 67741.9 Da PI: 7.5463

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021680889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.9	2.4e-29	284	343	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_021680889.1 284 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCAEDLSILVTTYEGTHNHK 343 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 627 aa Download sequence
MEDVFRRSGH GALPKEKKSA DDYSSAGYHH HELACREEVL AKVGGKRAYH ENSDDLKSSL 60 SEHDKDLSLT KQVVVADNKE RSTMESESKA SSSSQKEQDN WLESARAEVG EVREENQRLK 120 MYLGQVMKDY QALQVKFYDI IRQEETKKST SAVDNNQQAV EESELVSLSL GRFSSESKKD 180 GKSKTYSNGK DDETANNEGD LSLGLDCKFE ASKSHNANGE PLANPISPIN SLEDQPKEEA 240 RETWPPPKVP KTTMPGGGDD EVIQQNPLKK ARVCVRARCD TPTMNDGCQW RKYGQKISKG 300 NPCPRAYYRC TVAPSCPVRK QVQRCAEDLS ILVTTYEGTH NHKLPLAATA MASTTSAAAS 360 MLLSGSSSSS SRTSPNPSST TAAGLHGLNF YLFDNSNSKQ FYSHNSSLSA SPSHPTITLD 420 LTANASSSQF NRFYSNNSPI LKSTPTGLNF SSAESKAMPW GNGLLSYGSA SQPYHRNQLG 480 TLTSSGRPPM ENSHCQPYMQ KKTASTPQQP LPDTIAAATK AITADPNFQS ALAAAFMSII 540 GSGGENLGGG DNFAQKLKWG EHFPVASGNS SLPTPKGNNI ACATSYLNQT TSANSQAGNL 600 MFLPPSLPFA SPKSASASPG DNRDSTN

Sequence ? help Back to Top

Protein Sequence Length: 627 aa Download sequence

MEDVFRRSGH GALPKEKKSA DDYSSAGYHH HELACREEVL AKVGGKRAYH ENSDDLKSSL  60
SEHDKDLSLT KQVVVADNKE RSTMESESKA SSSSQKEQDN WLESARAEVG EVREENQRLK  120
MYLGQVMKDY QALQVKFYDI IRQEETKKST SAVDNNQQAV EESELVSLSL GRFSSESKKD  180
GKSKTYSNGK DDETANNEGD LSLGLDCKFE ASKSHNANGE PLANPISPIN SLEDQPKEEA  240
RETWPPPKVP KTTMPGGGDD EVIQQNPLKK ARVCVRARCD TPTMNDGCQW RKYGQKISKG  300
NPCPRAYYRC TVAPSCPVRK QVQRCAEDLS ILVTTYEGTH NHKLPLAATA MASTTSAAAS  360
MLLSGSSSSS SRTSPNPSST TAAGLHGLNF YLFDNSNSKQ FYSHNSSLSA SPSHPTITLD  420
LTANASSSQF NRFYSNNSPI LKSTPTGLNF SSAESKAMPW GNGLLSYGSA SQPYHRNQLG  480
TLTSSGRPPM ENSHCQPYMQ KKTASTPQQP LPDTIAAATK AITADPNFQS ALAAAFMSII  540
GSGGENLGGG DNFAQKLKWG EHFPVASGNS SLPTPKGNNI ACATSYLNQT TSANSQAGNL  600
MFLPPSLPFA SPKSASASPG DNRDSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	7e-72	WRKY family protein