PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021680838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 445aa MW: 49207.3 Da PI: 4.2647 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.4 | 9.6e-52 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd elv++yLk+kv gkkl++ ++i+evdiyk+ PwdLp k ++++++ +wyfF++r+kkya+g+r nrat+ gyWk+tgkd+ v+ XP_021680838.1 6 LPPGFRFHPTDVELVKYYLKRKVMGKKLHF-DAIAEVDIYKFPPWDLPdKsCLRTGDLKWYFFCPREKKYASGTRMNRATEFGYWKTTGKDRCVH 99 79**************************99.99**************96347788999************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++e+vg+ ktLvf++g+apkg +tdWvmheyrle XP_021680838.1 100 Y-NDEVVGMIKTLVFHRGKAPKGDRTDWVMHEYRLE 134 9.999*****************************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 445 aa Download sequence |
MGKRSLPPGF RFHPTDVELV KYYLKRKVMG KKLHFDAIAE VDIYKFPPWD LPDKSCLRTG 60 DLKWYFFCPR EKKYASGTRM NRATEFGYWK TTGKDRCVHY NDEVVGMIKT LVFHRGKAPK 120 GDRTDWVMHE YRLEDKGVDL RGFAQDAYVI CSVFKKDGPG PKNGAQYGAP FKEEDWDDDD 180 EEEEEEEVNC VEVATSVGVS ALVPLYQNSN IVTSSHLEGD DEEEVNCAEV AASAGMTAPM 240 PVYQNGNIAT SSHLSESTCV ESTVLPPSEL PSESNAAAVV GDSYFASAEP SQVGSENDGI 300 FAMLANILEE SPSIQSQNDM NEQVHDINHG GNNAVNPNSN GIDIYDGLGD LGNLTRIDEG 360 AYSTLDYTGP AMDQMLGSDD MQYLELMDLD APLDRSTEPG GYEQVQTGGL HVDENQFFNA 420 EDLHCVVNSC NSAELFHGTV GHPQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64060.1 | 2e-92 | NAC family protein |