PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021679928.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 542aa    MW: 60810.6 Da    PI: 5.9826
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021679928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS268.62e-821565332374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL  cA a+++g+l+++q+lL  l+elas++gd+++Rla+y ++AL ++l++  se+++ + p + ++++      +l  f+evsP++ f + 
  XP_021679928.1 156 EQLLNPCAAAITTGNLSRVQHLLYVLHELASSSGDANHRLAFYGLRALTHHLSS--SETSAYVGPISFASTEPRFFQRSLIKFYEVSPWFAFPNN 248
                     689***************************************************..55555566666665555555556666************* PP

            GRAS  97 taNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.........skeeleetgerLakfAeelgvpfe 177
                     +aN+ Il+ +++e    +++Hi+D+++s+G+QWp+Ll+aL+ Rp ++pp++RiT++ +  ++         +     +   rL +fA++++++++
  XP_021679928.1 249 IANSSILQILAQEldhkRTLHILDIGVSHGVQWPTLLEALTRRPgGPPPQVRITVITATVEDdqntetpfsEGPPGDNFSPRLLSFAKSMNINLQ 343
                     *********99999887889************************55667*******99777677778888777888999**************** PP

            GRAS 178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..ns.esFlerflealeyysalfd 269
                     +n l  + l++l+ + ++++p+E+l+V+ +++lhrl    +++++er+e+L+++++l Pk v+++e+++d+  ns + F+++f++ ++y ++++d
  XP_021679928.1 344 INRLDNHLLQNLNGKIINTDPEENLIVCAQFRLHRLN---HNTPDERTEFLRVLRDLDPKGVILSENNTDCscNScGHFATGFSRRVDYLWKFLD 435
                     ***98889****************************8...77777889*******************96664354259***************** PP

            GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWk 363
                     s+++ +    + r + Er++++ e+ ++++++g++    +e +ekW er++ +GF    ++e++ +  ++llrk++ ++++r+ee+++++ l+Wk
  XP_021679928.1 436 STSSAF----KGRETEERRVMEGEAAKALTNRGEM----NEGKEKWCERMRGVGFVGEVFGEDVIDGGRALLRKYDnNWEMRIEEKDECVGLCWK 522
                     **8886....88888999999999******99999....9************************************9999*************** PP

            GRAS 364 drpLvsvSaWr 374
                     ++p+ ++S W+
  XP_021679928.1 523 GQPVSFCSLWK 533
                     **********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    
MTLEEPEPNL ISDHVLDWLE DSVSFLPAFL DDPYNSPDIN SYQWWNQTEE ICQDPINTNT  60
NLSSTTFNAD STSLIGASNP TSSNHQQPSN SSRKREAPDD PVPKTSQNHH QRKKQNEDQD  120
GDVVAGKRSN GNKKGNSKST GNNGNNGNNK EGRWAEQLLN PCAAAITTGN LSRVQHLLYV  180
LHELASSSGD ANHRLAFYGL RALTHHLSSS ETSAYVGPIS FASTEPRFFQ RSLIKFYEVS  240
PWFAFPNNIA NSSILQILAQ ELDHKRTLHI LDIGVSHGVQ WPTLLEALTR RPGGPPPQVR  300
ITVITATVED DQNTETPFSE GPPGDNFSPR LLSFAKSMNI NLQINRLDNH LLQNLNGKII  360
NTDPEENLIV CAQFRLHRLN HNTPDERTEF LRVLRDLDPK GVILSENNTD CSCNSCGHFA  420
TGFSRRVDYL WKFLDSTSSA FKGRETEERR VMEGEAAKAL TNRGEMNEGK EKWCERMRGV  480
GFVGEVFGED VIDGGRALLR KYDNNWEMRI EEKDECVGLC WKGQPVSFCS LWKSGMNIKG  540
KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-171GRAS family protein