PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021679838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GRF | ||||||||
Protein Properties | Length: 341aa MW: 38365.4 Da PI: 8.6772 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78.9 | 4.8e-25 | 76 | 119 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e XP_021679838.1 76 DPEPGRCRRTDGKKWRCSKEAFPDSKYCERHMHRGRNRSRKPVE 119 79***************************************986 PP | |||||||
2 | QLQ | 62.5 | 1.1e-21 | 11 | 46 | 1 | 36 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FT++Q+q+L++Q+l+yKy+++++P+PpeL+ ++ XP_021679838.1 11 SPFTPTQWQELEHQALIYKYMVSGVPIPPELIYSVK 46 89*****************************87665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MMNATNTRNR SPFTPTQWQE LEHQALIYKY MVSGVPIPPE LIYSVKRSLE SSLASRLFPH 60 QPRWGCFQVG FGRKADPEPG RCRRTDGKKW RCSKEAFPDS KYCERHMHRG RNRSRKPVEL 120 ASTTTSTTAT TTVINPSPSI NRNLSTTSPF ASSYSLSPLS SPTEPEFHVY QNPSHSSILN 180 PFLYPHSSSS GPPGSGFSPQ NSTTHNLFLD SGSSSHAEND YRYFHGMREG VDERAFFPEA 240 SGSARSLQDS YQQLAMSSYK GYSHLQFDSS ADTSKQQQED QQQHCFVLGT DFKSSATRPI 300 KLEKEGETQK PLHHFFGEWP PKSADSWLDL APSSRLHTAD S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 4e-64 | GRF family protein |