PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679630.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 411aa MW: 45999.9 Da PI: 6.7166

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	83.2	3.4e-26	301	387	1	86
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++ ev+aLi +r+ +e+++r+ g + + W+e+s m g++r++k+Ckekwen+nk+++k e+ +k++ e+s+tcpyf++l+ XP_021679630.1 301 RWPEAEVQALIMLRTALEQKFRAmGTKCSNIWDEISVGMCNMGYNRTAKKCKEKWENINKYFRKSMESGGKKQHENSKTCPYFHELH 387 8*******************8467779******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MELLTGDRRV PNSTTDFAQR IFPFQATGNL LISNPMAVIH SSDIDGQNLP PQKLRPIRAN 60 GRSPSSSQAN DLPLVDGLDG TLENLGLLAD QVCGISGEDS EYFKPPVKAE ASEMVLNSFG 120 VTGAPCLVAD SSAGIGSDAG GENQHPNGVR GLLEVESSSF SDDDSSAGII KGCVGRKRKR 180 RTREKLKDFL ENLVSKVMEK QEQMHKQLIE TMERIERERM IREEAWKQQE RERMRRDEEL 240 RAQENARNVA LISLIQNVMG DKIEIPQPLT AITSHAEKHG EKDASSISIQ NDFKCDPSNR 300 RWPEAEVQAL IMLRTALEQK FRAMGTKCSN IWDEISVGMC NMGYNRTAKK CKEKWENINK 360 YFRKSMESGG KKQHENSKTC PYFHELHLLY KSGFVNPGNA NIENETNSSQ G

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MELLTGDRRV PNSTTDFAQR IFPFQATGNL LISNPMAVIH SSDIDGQNLP PQKLRPIRAN  60
GRSPSSSQAN DLPLVDGLDG TLENLGLLAD QVCGISGEDS EYFKPPVKAE ASEMVLNSFG  120
VTGAPCLVAD SSAGIGSDAG GENQHPNGVR GLLEVESSSF SDDDSSAGII KGCVGRKRKR  180
RTREKLKDFL ENLVSKVMEK QEQMHKQLIE TMERIERERM IREEAWKQQE RERMRRDEEL  240
RAQENARNVA LISLIQNVMG DKIEIPQPLT AITSHAEKHG EKDASSISIQ NDFKCDPSNR  300
RWPEAEVQAL IMLRTALEQK FRAMGTKCSN IWDEISVGMC NMGYNRTAKK CKEKWENINK  360
YFRKSMESGG KKQHENSKTC PYFHELHLLY KSGFVNPGNA NIENETNSSQ G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	181	RKRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47660.1	7e-43	Trihelix family protein