PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679619.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 612aa MW: 66980.4 Da PI: 8.6193

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679619.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.4	7.8e-09	497	545	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_021679619.1 497 AWTLSEVMKLVEGVSRYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 545 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
METEVGVEGN DEGKFEEAGF GKTYSSLSST KQLTDPVVYK LVRVEGDGRL VPATDDEVME 60 VKGLLIDEKS EMHIVADIGQ PIGCISNEGS SSGMLLQLES SEGLSQFENT EVDPDKLNAR 120 LEETVPSFTP SLIDSHLHQS GSIDECSNTP VLTEGGALPS TTVTTSKPDF SKLNGEICLD 180 NLSIKELHET FKATFGRETT VKDKQWLKRR ITMGLTNSCD VSATTFIIKD NKLVKKGKED 240 GCDNVDGALA YNLAVGTTIN CSQQGAPISH GSQLEDQVVS DKRNRSTGDN SGSEDHHTEQ 300 RAAKRVRKPT RRYIEELSEV ESKESSGKLR TTVKSSAFGQ MSSKFHFRPV RNVSSDGRTV 360 VTRLDSLGGS GIQIPCVSRV RRSRPRKNFM ALLKFNPNSM GMTATLVKKA LGAHSFLPDN 420 YESEKAQSAP AQVQQRVRSV MYLFLGVPDK DKQFTAVGAV GGHHKVLKQV DSSGDSDDNI 480 VTVPTSKGGI RRKHHRAWTL SEVMKLVEGV SRYGAGRWSE IKRLAFASYS YRTSVDLKDK 540 WRNLLKASFA HIPSDKGVNS RKNAATMPIP EPILLRVREL AERQSQVPPN LTSGKEAGSS 600 GSSVHEKQSG YL

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

METEVGVEGN DEGKFEEAGF GKTYSSLSST KQLTDPVVYK LVRVEGDGRL VPATDDEVME  60
VKGLLIDEKS EMHIVADIGQ PIGCISNEGS SSGMLLQLES SEGLSQFENT EVDPDKLNAR  120
LEETVPSFTP SLIDSHLHQS GSIDECSNTP VLTEGGALPS TTVTTSKPDF SKLNGEICLD  180
NLSIKELHET FKATFGRETT VKDKQWLKRR ITMGLTNSCD VSATTFIIKD NKLVKKGKED  240
GCDNVDGALA YNLAVGTTIN CSQQGAPISH GSQLEDQVVS DKRNRSTGDN SGSEDHHTEQ  300
RAAKRVRKPT RRYIEELSEV ESKESSGKLR TTVKSSAFGQ MSSKFHFRPV RNVSSDGRTV  360
VTRLDSLGGS GIQIPCVSRV RRSRPRKNFM ALLKFNPNSM GMTATLVKKA LGAHSFLPDN  420
YESEKAQSAP AQVQQRVRSV MYLFLGVPDK DKQFTAVGAV GGHHKVLKQV DSSGDSDDNI  480
VTVPTSKGGI RRKHHRAWTL SEVMKLVEGV SRYGAGRWSE IKRLAFASYS YRTSVDLKDK  540
WRNLLKASFA HIPSDKGVNS RKNAATMPIP EPILLRVREL AERQSQVPPN LTSGKEAGSS  600
GSSVHEKQSG YL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	381	387	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-99	MYB_related family protein