PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679614.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 661aa MW: 72560.5 Da PI: 7.2099

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679614.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.6e-09	546	594	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_021679614.1 546 AWTLSEVMKLVEGVSRYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 594 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
METEVGVEGN DEGKFEEAGF GKTYSSLSST KQLTDPVVYK LVRVEGDGRL VPATDDEVME 60 VKGLLIDEKS EMHIVADIGQ PIGCISNEGS SSGMLLQLES SEGLSQFENT EVDPDKLNAR 120 LEYIEEMLQK VKEEERLRLA CGSRDYSSAY VIVDSQCSDQ LDKLPGIDEN LQSEIPLQET 180 VPSFTPSLID SHLHQSGSID ECSNTPVLTE GGALPSTTVT TSKPDFSKLN GEICLDNLSI 240 KELHETFKAT FGRETTVKDK QWLKRRITMG LTNSCDVSAT TFIIKDNKLV KKGKEDGCDN 300 VDGALAYNLA VGTTINCSQQ GAPISHGSQL EDQVVSDKRN RSTGDNSGSE DHHTEQRAAK 360 RVRKPTRRYI EELSEVESKE SSGKLRTTVK SSAFGQMSSK FHFRPVRNVS SDGRTVVTRL 420 DSLGGSGIQI PCVSRVRRSR PRKNFMALLK FNPNSMGMTA TLVKKALGAH SFLPDNYESE 480 KAQSAPAQVQ QRFLGVPDKD KQFTAVGAVG GHHKVLKQVD SSGDSDDNIV TVPTSKGGIR 540 RKHHRAWTLS EVMKLVEGVS RYGAGRWSEI KRLAFASYSY RTSVDLKDKW RNLLKASFAH 600 IPSDKGVNSR KNAATMPIPE PILLRVRELA ERQSQVPPNL TSGKEAGSSG SSVHEKQSGY 660 L

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

METEVGVEGN DEGKFEEAGF GKTYSSLSST KQLTDPVVYK LVRVEGDGRL VPATDDEVME  60
VKGLLIDEKS EMHIVADIGQ PIGCISNEGS SSGMLLQLES SEGLSQFENT EVDPDKLNAR  120
LEYIEEMLQK VKEEERLRLA CGSRDYSSAY VIVDSQCSDQ LDKLPGIDEN LQSEIPLQET  180
VPSFTPSLID SHLHQSGSID ECSNTPVLTE GGALPSTTVT TSKPDFSKLN GEICLDNLSI  240
KELHETFKAT FGRETTVKDK QWLKRRITMG LTNSCDVSAT TFIIKDNKLV KKGKEDGCDN  300
VDGALAYNLA VGTTINCSQQ GAPISHGSQL EDQVVSDKRN RSTGDNSGSE DHHTEQRAAK  360
RVRKPTRRYI EELSEVESKE SSGKLRTTVK SSAFGQMSSK FHFRPVRNVS SDGRTVVTRL  420
DSLGGSGIQI PCVSRVRRSR PRKNFMALLK FNPNSMGMTA TLVKKALGAH SFLPDNYESE  480
KAQSAPAQVQ QRFLGVPDKD KQFTAVGAVG GHHKVLKQVD SSGDSDDNIV TVPTSKGGIR  540
RKHHRAWTLS EVMKLVEGVS RYGAGRWSEI KRLAFASYSY RTSVDLKDKW RNLLKASFAH  600
IPSDKGVNSR KNAATMPIPE PILLRVRELA ERQSQVPPNL TSGKEAGSSG SSVHEKQSGY  660
L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	437	443	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-125	MYB_related family protein