PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021679295.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 265aa    MW: 29474.4 Da    PI: 8.4826
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021679295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.13.6e-091035127
                    --S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                    +kt+ C  f+  G Ck G++C+FaHg+
  XP_021679295.1 10 FKTRMCAKFRT-GNCKNGENCNFAHGM 35
                    699******99.*************95 PP

2zf-CCCH30.18.2e-107396225
                    -S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                    k++lC+ f+ + +C+yGdrC+F H
  XP_021679295.1 73 KMKLCKKFYNGEECPYGDRCNFLH 96
                    789*******66************ PP

3zf-CCCH42.51e-13157183127
                     --S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                     +kt+lC  +  tG+C++G++C+FaHg+
  XP_021679295.1 157 WKTKLCTKWETTGQCPFGEKCHFAHGQ 183
                     8************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
IYKGTTNIFF KTRMCAKFRT GNCKNGENCN FAHGMQDLRQ PPPNWQELVG GGVRAEEDRS  60
AGNWDDDQRI IHKMKLCKKF YNGEECPYGD RCNFLHEDPS KFRDDIGRFR ESSAISIGTT  120
GQPMVPGIGG SNATEVNKPV INSCSDAFRA NMKPVYWKTK LCTKWETTGQ CPFGEKCHFA  180
HGQAELKVPG GRAEGENAGS ILTKPPVLAN NASPSTTASV PNVIEEAQSK KCLLKWKGPK  240
KINRIYGDWL DDLPLVQNLT NQVES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.12e-89C3H family protein