PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678979.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 401aa MW: 43870.7 Da PI: 7.1024

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678979.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	9.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl XP_021678979.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWSNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.8	9.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_021678979.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MGRSPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWSNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG 120 IDPVTHKPKN DALLSSDGQS KNTANLSHMA QWESARLEAE ARLVRESKLR SHSFQHQLSP 180 TGYVSRSGSG SASASTSAQP QRSLDAPKAW NDGWSKLCTE GNIIGLNTAG LGADLESPTS 240 TVTVSENAPP QIMNSSGTGG QNSIPMIELV GTSGSSETGI IKEEGEHNWK TLGNSNHHLS 300 ENSVSFTSGL HHSDLTISME GPWTPESLRL NSGHLQIGNV MEEGFTTLLL SDSGDRNLMD 360 SGKDSDHNSG GSGGDYYEDN KNYWNSILNL VNSSPTDSPM F

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MGRSPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWSNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG  120
IDPVTHKPKN DALLSSDGQS KNTANLSHMA QWESARLEAE ARLVRESKLR SHSFQHQLSP  180
TGYVSRSGSG SASASTSAQP QRSLDAPKAW NDGWSKLCTE GNIIGLNTAG LGADLESPTS  240
TVTVSENAPP QIMNSSGTGG QNSIPMIELV GTSGSSETGI IKEEGEHNWK TLGNSNHHLS  300
ENSVSFTSGL HHSDLTISME GPWTPESLRL NSGHLQIGNV MEEGFTTLLL SDSGDRNLMD  360
SGKDSDHNSG GSGGDYYEDN KNYWNSILNL VNSSPTDSPM F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-127	MYB family protein