PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678844.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 652aa MW: 72376.5 Da PI: 6.9535

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.1	1.6e-23	76	176	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++ +k+a+e+ +++ + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF + ++ XP_021678844.1 76 FCKILTASDTSTHGGFSVLRKHATEClprldmNQV-TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL--RGDN 167 99**************************96334.44569********************************************..3489 PP E..EEEEE- CS B3 90 felvvkvfr 98 +el+v+v+r XP_021678844.1 168 GELRVGVRR 176 999**98 PP
2	Auxin_resp	100.5	2.2e-33	202	281	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+Y+Pr+ s+F++ ++k++ a+++ +svGmRfkm+fe+eds+err++Gt+vgv +++p W++SkWrsLk XP_021678844.1 202 ASHAVTTQTLFVVYYKPRT--SQFIIGLNKYLGAVNHGLSVGMRFKMRFEGEDSPERRFTGTIVGVGEISP-DWSGSKWRSLK 281 689*************6..9******************************************999.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MEQLEASTNQ ELTQQIPRFN LPSKILCRVV NIQLLAEQET DDVYAQITLH PEPDQAEPTS 60 PDSCPPEPQK PTVHSFCKIL TASDTSTHGG FSVLRKHATE CLPRLDMNQV TPTQELVAKD 120 LHGYEWRFKH IFRGQPRRHL LTTGWSTFVT SKRLVAGDAF VFLRGDNGEL RVGVRRLARQ 180 QTPMPSSVIS SQSMHLGVLA TASHAVTTQT LFVVYYKPRT SQFIIGLNKY LGAVNHGLSV 240 GMRFKMRFEG EDSPERRFTG TIVGVGEISP DWSGSKWRSL KVQWDEPATI QRPERVSPWD 300 IEPFAAFASV NLPPTVVKSK RPRPVDTPVS EITTNSTTSP FWYHGSAQSH ELSQLGSAAE 360 AQSGESQVVW PMRQKEIDSS ILNGSSCNSR VRPEGIWPSS SSHMNVSLSL FPDSADDNRT 420 ITTQTVISGY ASPVPSRQSN GLVHNLVEKG KKYENSVGCR LFGIDLTRNS NAAAPPEKDS 480 LCSTVDPNGT RGPVSAADDS DKAQNMDVFK SSKELKQIAS DTFPRETHNK LGSSSTRTRT 540 KVQMQGVAVG RAVDLTVLKG YGDLIKELEE MFEIKGELST RDKWAVVFTD DEGDMMLLGD 600 DPWLEFCKMV KKILIYSSEE AKKMSTRYKF LASSLEDEGT IASFNSEHKS DT

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MEQLEASTNQ ELTQQIPRFN LPSKILCRVV NIQLLAEQET DDVYAQITLH PEPDQAEPTS  60
PDSCPPEPQK PTVHSFCKIL TASDTSTHGG FSVLRKHATE CLPRLDMNQV TPTQELVAKD  120
LHGYEWRFKH IFRGQPRRHL LTTGWSTFVT SKRLVAGDAF VFLRGDNGEL RVGVRRLARQ  180
QTPMPSSVIS SQSMHLGVLA TASHAVTTQT LFVVYYKPRT SQFIIGLNKY LGAVNHGLSV  240
GMRFKMRFEG EDSPERRFTG TIVGVGEISP DWSGSKWRSL KVQWDEPATI QRPERVSPWD  300
IEPFAAFASV NLPPTVVKSK RPRPVDTPVS EITTNSTTSP FWYHGSAQSH ELSQLGSAAE  360
AQSGESQVVW PMRQKEIDSS ILNGSSCNSR VRPEGIWPSS SSHMNVSLSL FPDSADDNRT  420
ITTQTVISGY ASPVPSRQSN GLVHNLVEKG KKYENSVGCR LFGIDLTRNS NAAAPPEKDS  480
LCSTVDPNGT RGPVSAADDS DKAQNMDVFK SSKELKQIAS DTFPRETHNK LGSSSTRTRT  540
KVQMQGVAVG RAVDLTVLKG YGDLIKELEE MFEIKGELST RDKWAVVFTD DEGDMMLLGD  600
DPWLEFCKMV KKILIYSSEE AKKMSTRYKF LASSLEDEGT IASFNSEHKS DT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	320	324	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein