PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678843.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 704aa MW: 78082.9 Da PI: 6.827

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74	1.8e-23	128	228	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++ +k+a+e+ +++ + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF + ++ XP_021678843.1 128 FCKILTASDTSTHGGFSVLRKHATEClprldmNQV-TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL--RGDN 219 99**************************96334.44569********************************************..3489 PP E..EEEEE- CS B3 90 felvvkvfr 98 +el+v+v+r XP_021678843.1 220 GELRVGVRR 228 999**98 PP
2	Auxin_resp	100.4	2.5e-33	254	333	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+Y+Pr+ s+F++ ++k++ a+++ +svGmRfkm+fe+eds+err++Gt+vgv +++p W++SkWrsLk XP_021678843.1 254 ASHAVTTQTLFVVYYKPRT--SQFIIGLNKYLGAVNHGLSVGMRFKMRFEGEDSPERRFTGTIVGVGEISP-DWSGSKWRSLK 333 689*************6..9******************************************999.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 704 aa Download sequence
MAHVESNLRG ASISHGDRGG DDLYTELWKA CAGPLVEVPR PGERVFYFPQ GHMEQLEAST 60 NQELTQQIPR FNLPSKILCR VVNIQLLAEQ ETDDVYAQIT LHPEPDQAEP TSPDSCPPEP 120 QKPTVHSFCK ILTASDTSTH GGFSVLRKHA TECLPRLDMN QVTPTQELVA KDLHGYEWRF 180 KHIFRGQPRR HLLTTGWSTF VTSKRLVAGD AFVFLRGDNG ELRVGVRRLA RQQTPMPSSV 240 ISSQSMHLGV LATASHAVTT QTLFVVYYKP RTSQFIIGLN KYLGAVNHGL SVGMRFKMRF 300 EGEDSPERRF TGTIVGVGEI SPDWSGSKWR SLKVQWDEPA TIQRPERVSP WDIEPFAAFA 360 SVNLPPTVVK SKRPRPVDTP VSEITTNSTT SPFWYHGSAQ SHELSQLGSA AEAQSGESQV 420 VWPMRQKEID SSILNGSSCN SRVRPEGIWP SSSSHMNVSL SLFPDSADDN RTITTQTVIS 480 GYASPVPSRQ SNGLVHNLVE KGKKYENSVG CRLFGIDLTR NSNAAAPPEK DSLCSTVDPN 540 GTRGPVSAAD DSDKAQNMDV FKSSKELKQI ASDTFPRETH NKLGSSSTRT RTKVQMQGVA 600 VGRAVDLTVL KGYGDLIKEL EEMFEIKGEL STRDKWAVVF TDDEGDMMLL GDDPWLEFCK 660 MVKKILIYSS EEAKKMSTRY KFLASSLEDE GTIASFNSEH KSDT

Sequence ? help Back to Top

Protein Sequence Length: 704 aa Download sequence

MAHVESNLRG ASISHGDRGG DDLYTELWKA CAGPLVEVPR PGERVFYFPQ GHMEQLEAST  60
NQELTQQIPR FNLPSKILCR VVNIQLLAEQ ETDDVYAQIT LHPEPDQAEP TSPDSCPPEP  120
QKPTVHSFCK ILTASDTSTH GGFSVLRKHA TECLPRLDMN QVTPTQELVA KDLHGYEWRF  180
KHIFRGQPRR HLLTTGWSTF VTSKRLVAGD AFVFLRGDNG ELRVGVRRLA RQQTPMPSSV  240
ISSQSMHLGV LATASHAVTT QTLFVVYYKP RTSQFIIGLN KYLGAVNHGL SVGMRFKMRF  300
EGEDSPERRF TGTIVGVGEI SPDWSGSKWR SLKVQWDEPA TIQRPERVSP WDIEPFAAFA  360
SVNLPPTVVK SKRPRPVDTP VSEITTNSTT SPFWYHGSAQ SHELSQLGSA AEAQSGESQV  420
VWPMRQKEID SSILNGSSCN SRVRPEGIWP SSSSHMNVSL SLFPDSADDN RTITTQTVIS  480
GYASPVPSRQ SNGLVHNLVE KGKKYENSVG CRLFGIDLTR NSNAAAPPEK DSLCSTVDPN  540
GTRGPVSAAD DSDKAQNMDV FKSSKELKQI ASDTFPRETH NKLGSSSTRT RTKVQMQGVA  600
VGRAVDLTVL KGYGDLIKEL EEMFEIKGEL STRDKWAVVF TDDEGDMMLL GDDPWLEFCK  660
MVKKILIYSS EEAKKMSTRY KFLASSLEDE GTIASFNSEH KSDT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	372	376	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein