PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678803.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 491aa MW: 53371.6 Da PI: 7.2704

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678803.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.1	3.8e-33	239	295	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK++kgse+prsYY+Ct+ +C vkkkvers+ d++++ei+Y+g Hnh+ XP_021678803.1 239 DDGYNWRKYGQKPIKGSEYPRSYYKCTHLNCLVKKKVERSS-DGQITEIIYKGLHNHD 295 8**************************************.*************7 PP
2	WRKY	36.9	7.2e-12	419	453	1	36
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkk 36 ldDgy+WrKYGqK+vkg+++p sY+ ++C XP_021678803.1 419 LDDGYRWRKYGQKVVKGNPHP-SYWCFNRKHCLISA 453 59******************9.56644445887655 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MAGKQISSTT TTAAPPPARP TILLPPRPSM DTLFTGGLSP GPMTLVSSFF SDNYPDSDCR 60 SFSQLLAGAM GSPIARPAFF TDASVPNNSI SSVKQDGAGN NSNLGFKQSR PVNLVVAPSP 120 LFTVPPGLSP SGLLNSPGFF SAPQSPFGMS HQQALAQVTA QAAVAAQSHM HLQAQYQPAP 180 VAPSTELLTH HPSFTTGEAS QQQMLPSTSE HPSSMVESSD LSHSDRRQQP PLAVDKPNDD 240 GYNWRKYGQK PIKGSEYPRS YYKCTHLNCL VKKKVERSSD GQITEIIYKG LHNHDQPQPN 300 KRAKDNSDIN GGINSQAKFE LSSQSQAGNM NKLSETLPSH SVHGREQEST QADPIELPGS 360 SDSEEAGDRA TRPEDGDDDD EPKPKRRHTD VGTSEAALPH KTVTEPKIIV QTRSEVDLLD 420 DGYRWRKYGQ KVVKGNPHPS YWCFNRKHCL ISARITSDAL IIWTGAITNA LVQDAMFVSM 480 LRELQPTPKL S

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MAGKQISSTT TTAAPPPARP TILLPPRPSM DTLFTGGLSP GPMTLVSSFF SDNYPDSDCR  60
SFSQLLAGAM GSPIARPAFF TDASVPNNSI SSVKQDGAGN NSNLGFKQSR PVNLVVAPSP  120
LFTVPPGLSP SGLLNSPGFF SAPQSPFGMS HQQALAQVTA QAAVAAQSHM HLQAQYQPAP  180
VAPSTELLTH HPSFTTGEAS QQQMLPSTSE HPSSMVESSD LSHSDRRQQP PLAVDKPNDD  240
GYNWRKYGQK PIKGSEYPRS YYKCTHLNCL VKKKVERSSD GQITEIIYKG LHNHDQPQPN  300
KRAKDNSDIN GGINSQAKFE LSSQSQAGNM NKLSETLPSH SVHGREQEST QADPIELPGS  360
SDSEEAGDRA TRPEDGDDDD EPKPKRRHTD VGTSEAALPH KTVTEPKIIV QTRSEVDLLD  420
DGYRWRKYGQ KVVKGNPHPS YWCFNRKHCL ISARITSDAL IIWTGAITNA LVQDAMFVSM  480
LRELQPTPKL S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	2e-94	WRKY family protein