PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678796.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 533aa MW: 57985.5 Da PI: 8.013

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.9	4.3e-33	239	295	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK++kgse+prsYY+Ct+ +C vkkkvers+ d++++ei+Y+g Hnh+ XP_021678796.1 239 DDGYNWRKYGQKPIKGSEYPRSYYKCTHLNCLVKKKVERSS-DGQITEIIYKGLHNHD 295 8**************************************.*************7 PP
2	WRKY	105.2	3.4e-33	419	477	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+a d k+v++tYeg+Hnh+ XP_021678796.1 419 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERAAADSKAVITTYEGKHNHD 477 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MAGKQISSTT TTAAPPPARP TILLPPRPSM DTLFTGGLSP GPMTLVSSFF SDNYPDSDCR 60 SFSQLLAGAM GSPIARPAFF TDASVPNNSI SSVKQDGAGN NSNLGFKQSR PVNLVVAPSP 120 LFTVPPGLSP SGLLNSPGFF SAPQSPFGMS HQQALAQVTA QAAVAAQSHM HLQAQYQPAP 180 VAPSTELLTH HPSFTTGEAS QQQMLPSTSE HPSSMVESSD LSHSDRRQQP PLAVDKPNDD 240 GYNWRKYGQK PIKGSEYPRS YYKCTHLNCL VKKKVERSSD GQITEIIYKG LHNHDQPQPN 300 KRAKDNSDIN GGINSQAKFE LSSQSQAGNM NKLSETLPSH SVHGREQEST QADPIELPGS 360 SDSEEAGDRA TRPEDGDDDD EPKPKRRHTD VGTSEAALPH KTVTEPKIIV QTRSEVDLLD 420 DGYRWRKYGQ KVVKGNPHPR SYYKCTSAGC NVRKHVERAA ADSKAVITTY EGKHNHDVPA 480 ARNSSHNTAN YNAPQLKPQK VVAEKHPLLK GMEFANNDQR PVLLRLKEEE IAV

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MAGKQISSTT TTAAPPPARP TILLPPRPSM DTLFTGGLSP GPMTLVSSFF SDNYPDSDCR  60
SFSQLLAGAM GSPIARPAFF TDASVPNNSI SSVKQDGAGN NSNLGFKQSR PVNLVVAPSP  120
LFTVPPGLSP SGLLNSPGFF SAPQSPFGMS HQQALAQVTA QAAVAAQSHM HLQAQYQPAP  180
VAPSTELLTH HPSFTTGEAS QQQMLPSTSE HPSSMVESSD LSHSDRRQQP PLAVDKPNDD  240
GYNWRKYGQK PIKGSEYPRS YYKCTHLNCL VKKKVERSSD GQITEIIYKG LHNHDQPQPN  300
KRAKDNSDIN GGINSQAKFE LSSQSQAGNM NKLSETLPSH SVHGREQEST QADPIELPGS  360
SDSEEAGDRA TRPEDGDDDD EPKPKRRHTD VGTSEAALPH KTVTEPKIIV QTRSEVDLLD  420
DGYRWRKYGQ KVVKGNPHPR SYYKCTSAGC NVRKHVERAA ADSKAVITTY EGKHNHDVPA  480
ARNSSHNTAN YNAPQLKPQK VVAEKHPLLK GMEFANNDQR PVLLRLKEEE IAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-122	WRKY family protein