PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678713.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 395aa MW: 43337 Da PI: 7.1036

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	6.8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W + +++ g+ R++k+c++rw +yl XP_021678713.1 14 KGPWTPEEDQKLLAYIEKHGHGSWQSLPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.8	7.9e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++ G++ W++Ia +++ +Rt++++k++w+++l XP_021678713.1 67 RGKFSLQEEQTIIQLHALIGNK-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MVRSPCCEKG GLKKGPWTPE EDQKLLAYIE KHGHGSWQSL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALIGNKWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG 120 IDPVTHKPKV DAFGSGQSKD AAHLSHMAQW ESARLEAEAR LVRESKLTSK PLENQFGFSS 180 PQLSANKVAV AAAAAAAPPV RPKCLDVLKA WQGMVSGMFF VSSDSLESPT STLNFSEAVP 240 VVGFHHESSM AIPPPLQFPA CNITCKGGMN EDVSNSEYEW KCFEKSNQMA PQVKETLDGS 300 IPVHEMSTYS TENAWVLDSF RAAANENASI VNIVEGLSDI IPYNSGEQNS SMAGENTATI 360 ASCCAGGNHE DLQGNYWNSL LLNLVDPPPS GSPVF

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MVRSPCCEKG GLKKGPWTPE EDQKLLAYIE KHGHGSWQSL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALIGNKWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG  120
IDPVTHKPKV DAFGSGQSKD AAHLSHMAQW ESARLEAEAR LVRESKLTSK PLENQFGFSS  180
PQLSANKVAV AAAAAAAPPV RPKCLDVLKA WQGMVSGMFF VSSDSLESPT STLNFSEAVP  240
VVGFHHESSM AIPPPLQFPA CNITCKGGMN EDVSNSEYEW KCFEKSNQMA PQVKETLDGS  300
IPVHEMSTYS TENAWVLDSF RAAANENASI VNIVEGLSDI IPYNSGEQNS SMAGENTATI  360
ASCCAGGNHE DLQGNYWNSL LLNLVDPPPS GSPVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-104	MYB family protein