PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021678369.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 662aa    MW: 72248.9 Da    PI: 6.6572
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021678369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox634.3e-203085156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ +++t +q++ Le++F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  XP_021678369.1 30 KKRYHRHTGNQIQKLEAMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 85
                    678899***********************************************998 PP
2START52.31.7e-172263472104
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     +a +a++el+++ + +ep+W ks+    + +  d++ + f+++ v        ++ea+r+sg+v+m++  lv  ++d + +W e ++     a+t
  XP_021678369.1 226 IAASAMDELLRLLQTDEPLWIKSPtdgrDVLHLDTYQTLFPRA-VsrlknpnVRIEASRDSGFVIMNSLALVDMVMDAN-KWVELFPtivsVAKT 318
                     67899*******************8886556666665555554.459999999**************************.******99999**** PP

                     EEEECTT......EEEEEEEEXXTTXX-S CS
           START  82 levissg......galqlmvaelqalspl 104
                     levissg      g lqlm+ elq+lspl
  XP_021678369.1 319 LEVISSGmmgshsGSLQLMYEELQVLSPL 347
                     **************************997 PP
3START50.94.7e-17348399156206
                     EECTCEEEEEEEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 156 pksnghskvtwvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     +++ng+skvtwvehv+ +++ p h l+r lv+sg+a+ga +w+atlqr+ce+
  XP_021678369.1 348 DMPNGYSKVTWVEHVEIEDKAPtHRLYRDLVHSGMAFGAERWLATLQRLCER 399
                     689***********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 662 aa     Download sequence    
MEYGSGGGSG GGGGSGSGGD HDPSDPHRRK KRYHRHTGNQ IQKLEAMFKE CPHPDEKQRL  60
QLSRELGLAP RQIKFWFQNR RTQMKAQHER ADNCALRAEN DKIRCENIAI REALRNVICP  120
SCGGPPVTED SYFDEHKLRM ENAQLKEELD RVSSIAAKYI GRPISHLPPV QPIHISSLDL  180
SMGSFGGQGN GAPSLDLDLD LIPSTSNLPF HPLGISDMDK SLMTDIAASA MDELLRLLQT  240
DEPLWIKSPT DGRDVLHLDT YQTLFPRAVS RLKNPNVRIE ASRDSGFVIM NSLALVDMVM  300
DANKWVELFP TIVSVAKTLE VISSGMMGSH SGSLQLMYEE LQVLSPLDMP NGYSKVTWVE  360
HVEIEDKAPT HRLYRDLVHS GMAFGAERWL ATLQRLCERF ACLMVSGNST RDLGGVIPSP  420
DGKRSMMKLA QRMVNSFCAS ISTSNSHRWT TVSGMNEVGV RVHKSTDPGQ PNGVVLNAAT  480
TFWLPVSPQN VFNFFKDERT RAQWDVLSSG NAVQEVAHIA NGSHPGNCIS VLRAFNSGQN  540
NMLILQESCI DASGSLVVYC PVDLPAVNIA MSGEDPAYIP LLPSGFTISP DGHPDHGDGA  600
SSSSNTHGSI GRSSGSLITV SFQILVSSLP SAKLNLESVT TVNNLISTTV QQIKAAMNCP  660
SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein