PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678312.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 494aa MW: 53101.8 Da PI: 7.7336

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678312.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.6	5.2e-24	179	222	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rC+RtDGKkWRCsr+v +++k+CErH h++r rsrk++e XP_021678312.1 179 DPEPWRCKRTDGKKWRCSRDVAPDQKYCERHSHKSRPRSRKPVE 222 79***************************************986 PP
2	QLQ	57	6e-20	117	152	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ+q+L++Q +yKy++a++PvPpeLl +i+k XP_021678312.1 117 PFTAAQWQELERQTIIYKYIMASVPVPPELLTPITK 152 9********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MSSTECAKAK AWDVGLVLRM QAKESCRVMS NHEASQLLSS SSSSGGGGGG GGGPMFYSRS 60 NRVACFGDIY DAVDSGSSST SGASDAAAVG KPLHPFNSSY TFNPLGEMTP SVNAGVPFTA 120 AQWQELERQT IIYKYIMASV PVPPELLTPI TKTQTNIPSS QSHVLKGSLE LGISSCNSDP 180 EPWRCKRTDG KKWRCSRDVA PDQKYCERHS HKSRPRSRKP VELHADSMAN SSYITNTRLP 240 NQKSNFSSHT NSHLSIFPTA MVSAATSYDQ PRSLEWFLKG ETVPVASNSN QQWRHLKGDS 300 SKGDEKVYHF QHHYRGGQLD SNSYMDLKGS HSLQTHRLND SCSLLLSAKS ATSLEATLNP 360 NNQTQAQETR HFLDTWSSAL GEITAGIGND CCVSSNEKLL PLSSLTLSMC GRTETSEENE 420 NAQGGSFGIM GSDKDGVGVQ RPQWMTHGSW MGSSGGPLAE ALCLGISNSA KADSKLASSH 480 GSSYGTNAGM NSTS

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MSSTECAKAK AWDVGLVLRM QAKESCRVMS NHEASQLLSS SSSSGGGGGG GGGPMFYSRS  60
NRVACFGDIY DAVDSGSSST SGASDAAAVG KPLHPFNSSY TFNPLGEMTP SVNAGVPFTA  120
AQWQELERQT IIYKYIMASV PVPPELLTPI TKTQTNIPSS QSHVLKGSLE LGISSCNSDP  180
EPWRCKRTDG KKWRCSRDVA PDQKYCERHS HKSRPRSRKP VELHADSMAN SSYITNTRLP  240
NQKSNFSSHT NSHLSIFPTA MVSAATSYDQ PRSLEWFLKG ETVPVASNSN QQWRHLKGDS  300
SKGDEKVYHF QHHYRGGQLD SNSYMDLKGS HSLQTHRLND SCSLLLSAKS ATSLEATLNP  360
NNQTQAQETR HFLDTWSSAL GEITAGIGND CCVSSNEKLL PLSSLTLSMC GRTETSEENE  420
NAQGGSFGIM GSDKDGVGVQ RPQWMTHGSW MGSSGGPLAE ALCLGISNSA KADSKLASSH  480
GSSYGTNAGM NSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	8e-45	GRF family protein