PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021678025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | E2F/DP | ||||||||
Protein Properties | Length: 465aa MW: 51698.5 Da PI: 4.6948 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 86.5 | 1.9e-27 | 143 | 208 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_021678025.1 143 RYDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 208 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 465 aa Download sequence |
MLNSQPPNPS TRQLQQNTMQ NPLKRQLPFS SMKPPFSAPG DYHRFSSEPR RVADHEVEAI 60 VVIPPPTKRK SDAADHEAES SEWNTSAGVT EVFNSPLQTP VSGKSGKAPK TSRLAKSSKS 120 GAQSAASNLG SPGNNLTPTG PCRYDSSLGL LTKKFINLIK HAEDGILDLN KAADTLEVQK 180 RRIYDITNVL EGIGLIEKKL KNRIQWKGLD VSRPGEADEN VASLQAEVEN LNIEEHRLDE 240 QIRVVQERLR DLSEDENNQK WLFVTEEDIK SLPCFQNETL IAIKAPHGTT LEVPDPDEAV 300 DYPQRRYRIV FRSTMGPIDV YLVSQFEEKF EEIHGVEPPA SYPSTSGFNE NQVNSMVPGE 360 SRGKEIEIQG QDAYRMCSDL NTSQDFVSGI MKIVPSDVDS DADYWLLSDA GVSITDIWRT 420 EPGVEWNEFG TLHDDYRMGN VSTPRPQTPP SNPTEVPSNV NNTAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.2 | 1e-167 | E2F/DP family protein |