PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021677940.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 407aa MW: 45351.3 Da PI: 7.5751

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021677940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.8	1e-40	170	247	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +ak+yhrrhkvCe+hskap+v+v gleqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk+++ XP_021677940.1 170 RCQVEGCQVVLVNAKDYHRRHKVCEMHSKAPKVIVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSH 247 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MENDGNLYTA HSNRSRGQNS ANANLVWDMW EPNSSRFDWG NSSNGTTFFT ASVAAATTSA 60 ADTICSTHPD PTSAHALMFQ HQGLYHPLDH QYQQLSLYGG EGSHLHPDPH LMCLKLGKRH 120 YFEDTIPVVD RQVGFSIGKR GKPYYSVVGG HTGQSSSAHG GVGSAANVPR CQVEGCQVVL 180 VNAKDYHRRH KVCEMHSKAP KVIVLGLEQR FCQQCSRFHV VSEFDDSKRS CRRRLAGHNE 240 RRRKSSHDSV SRNPCPDKLM GGRFPYLASP TDRALSLLSS KSDSWITSSD LSSRSSAALR 300 ELIAENRAAI LARQLVHERH LQHNAMEDLG DHSEPSPNNS FIPHHHQVLA EAHNWDRFHD 360 TGTQLTLDLM QAPTSAFGFL STRGKNNKEE EEECSELWNT WAGAHVV

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MENDGNLYTA HSNRSRGQNS ANANLVWDMW EPNSSRFDWG NSSNGTTFFT ASVAAATTSA  60
ADTICSTHPD PTSAHALMFQ HQGLYHPLDH QYQQLSLYGG EGSHLHPDPH LMCLKLGKRH  120
YFEDTIPVVD RQVGFSIGKR GKPYYSVVGG HTGQSSSAHG GVGSAANVPR CQVEGCQVVL  180
VNAKDYHRRH KVCEMHSKAP KVIVLGLEQR FCQQCSRFHV VSEFDDSKRS CRRRLAGHNE  240
RRRKSSHDSV SRNPCPDKLM GGRFPYLASP TDRALSLLSS KSDSWITSSD LSSRSSAALR  300
ELIAENRAAI LARQLVHERH LQHNAMEDLG DHSEPSPNNS FIPHHHQVLA EAHNWDRFHD  360
TGTQLTLDLM QAPTSAFGFL STRGKNNKEE EEECSELWNT WAGAHVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27360.4	4e-37	SBP family protein