PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021677931.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 466aa MW: 50463.1 Da PI: 7.3833

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021677931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.3	1.8e-15	291	337	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RR++iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq XP_021677931.1 291 VHNQSERKRREKINQRMKTLQKLVPNS-----SKTDKASMLDEVIEYLKQLQ 337 6***********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MSQCVPSWDL DDNPSPAKQS LRSHSNSTAI DVPMLDYEVA ELTWENGRLA MHGLGPPRVP 60 AKPMASTSPS KYNWDKPRAN GTLESIVNQA TLLPQRKPGL ENSGCRSEEL VPWLEHNRAA 120 PAASATVTMD AMVPCSNRPD DRSAQVMDSV PGLGNCVVAS STRVRSCSGR AATQDEDALL 180 NAKRQTVARV PVAPEWSSRQ SVSGSATFRG DSKQVTLDTC ERDLGVGFTS TFGSQENTSC 240 GEPGTKTTAA DENDSVCHSG PQMDEGDDEE DKKKGNGKSS VSTKRSRAAA VHNQSERKRR 300 EKINQRMKTL QKLVPNSSKT DKASMLDEVI EYLKQLQAQV QMMSRMNMQP MMLPMAMQQQ 360 LQMSMLAPMN MGLGVGMGMG VMDMNSIARL NIPGISPVLH PSAFMPMASW DGSGARLQSA 420 STAVMPDPLS AFLACQSQPM TMDAYSRMAA IYQQLQQQPP ASSSKS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MSQCVPSWDL DDNPSPAKQS LRSHSNSTAI DVPMLDYEVA ELTWENGRLA MHGLGPPRVP  60
AKPMASTSPS KYNWDKPRAN GTLESIVNQA TLLPQRKPGL ENSGCRSEEL VPWLEHNRAA  120
PAASATVTMD AMVPCSNRPD DRSAQVMDSV PGLGNCVVAS STRVRSCSGR AATQDEDALL  180
NAKRQTVARV PVAPEWSSRQ SVSGSATFRG DSKQVTLDTC ERDLGVGFTS TFGSQENTSC  240
GEPGTKTTAA DENDSVCHSG PQMDEGDDEE DKKKGNGKSS VSTKRSRAAA VHNQSERKRR  300
EKINQRMKTL QKLVPNSSKT DKASMLDEVI EYLKQLQAQV QMMSRMNMQP MMLPMAMQQQ  360
LQMSMLAPMN MGLGVGMGMG VMDMNSIARL NIPGISPVLH PSAFMPMASW DGSGARLQSA  420
STAVMPDPLS AFLACQSQPM TMDAYSRMAA IYQQLQQQPP ASSSKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	301	ERKRRE
2	297	302	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-102	bHLH family protein