PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021677864.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 218aa MW: 23750.2 Da PI: 5.8164 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 92 | 7.2e-29 | 2 | 101 | 1 | 95 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C++lr++C++dC+l++++ p++q++++ +v+k+FG++ ++++++++p ++r+ +++sl++eA r+ +Pv+Gavg++++++++++q+ XP_021677864.1 2 SCNGCRILRKGCSEDCMLRQCLqwiinPQAQANATVFVAKFFGRAGLMSFISSVPLNQRPSLFQSLLFEAVGRTVNPVSGAVGLLWTGNWHVCQT 96 6*********************************************************************************************9 PP DUF260 91 kaela 95 ++ ++ XP_021677864.1 97 AVMTV 101 87665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MSCNGCRILR KGCSEDCMLR QCLQWIINPQ AQANATVFVA KFFGRAGLMS FISSVPLNQR 60 PSLFQSLLFE AVGRTVNPVS GAVGLLWTGN WHVCQTAVMT VLRGGALEPI LEFDGRMLGP 120 DLDNFSECVN FTPINVSSGS KTTRTTTLKR KRSDDDEGIC GLTNLDLCLM HPAEEKQRSV 180 TPSEEESEMT TLESGGYASA GTNCSLQGGE RKLLSLFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49940.1 | 1e-61 | LBD family protein |