PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021677651.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 280aa    MW: 32355.5 Da    PI: 5.4357
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021677651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-131461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd++l + +   G ++W+ +++  g+ R++k+c++rw +yl
   XP_021677651.1 14 RGPWTIEEDQKLMNFILHNGIHCWRMVPKLAGLLRCGKSCRLRWINYL 61
                     89******************************99************97 PP
2Myb_DNA-binding55.51.3e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg +T+ E+ ++++++ +lG++ W++Ia++++ gRt++++k++w++
   XP_021677651.1  67 RGGFTEMEENQIIQLHSRLGNR-WSKIASHFP-GRTDNEIKNHWNT 110
                      788*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MGRQPCCDKV GLKRGPWTIE EDQKLMNFIL HNGIHCWRMV PKLAGLLRCG KSCRLRWINY  60
LRPDLKRGGF TEMEENQIIQ LHSRLGNRWS KIASHFPGRT DNEIKNHWNT RIKKRLKQLG  120
VDLVTHKPIE QTEMSNSGMN NITIAEEREE NMEIKSQDDQ AKSDLIKTDD KKRGGKNDDE  180
ELVSMDETSD ILSNNYEMLC GTMDLGSWIK QLENNNTSSY SFSLPVDEYN NPSIGESPSL  240
QDMDSILSWD SFNNHLVDDI FFMENSQYCN IPADSVPKYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.12e-84MYB family protein