PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021677378.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 177aa MW: 20154.2 Da PI: 5.0267 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 20.1 | 1.2e-06 | 58 | 85 | 1 | 27 |
--S---SGGGGTS.--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartG.tCkyGdrCkFaHgp 27 ykt+lC++f+r C +G +C++aHg+ XP_021677378.1 58 YKTSLCSYFRRRSgSCCHGIKCRYAHGE 85 9********99777************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MSPNDSPIQN HEHEQPQLSN PESTGSNGGD NRGEKRKREE TAQSEMEEKV DPSLNPYYKT 60 SLCSYFRRRS GSCCHGIKCR YAHGEDELRP RPDNTWDPTS ERAKKAMKLE DNGDKCEERK 120 AEEVMMTEWL VDVGEGGEGE CLDPGLSKCL VHLPRKWTSY NLRNFLNEQE TAVCTGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28450.2 | 2e-36 | C3H family protein |