PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021676972.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HSF
Protein Properties Length: 274aa    MW: 31436.9 Da    PI: 7.9942
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021676972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.81e-34261172102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+ +++++sw +++ sfvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgFkkv  ++         weF+++ F+kg k+ll++
  XP_021676972.1  26 FLTKTYQLVDDPLTDRIVSWGDDQASFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADR---------WEFANECFRKGAKHLLSE 111
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  XP_021676972.1 112 IHRRKT 117
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MAFTVERCDE EMVFSVESQK AVPAPFLTKT YQLVDDPLTD RIVSWGDDQA SFVVWRPPEF  60
ARDLLPNYFK HNNFSSFVRQ LNTYGFKKVV ADRWEFANEC FRKGAKHLLS EIHRRKTPLN  120
QHPPVVLPHQ ILQQEESFGW IDPPIFPLSP KPTTDLLTAL SEDNQRLRRK NYMLLSELSH  180
MKSLYNDIIY FIQSHVKPAA ALPYEQKGYS STSPKIVELG SSCQDQISSK NLCLGKSSLT  240
LTEEESNGSV KLFGVPLSGK KRLHSEVIDQ QKLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.14e-87HSF family protein