PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021676422.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | TCP | ||||||||
Protein Properties | Length: 216aa MW: 23377.5 Da PI: 4.341 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 76.1 | 1e-23 | 52 | 110 | 20 | 66 |
TCP 20 RRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............s 66 RR+Rl+a caar+F+L++eLG +d++tieWLl++a+p+i+++tg+ s XP_021676422.1 52 RRIRLPAICAARIFQLTRELGNRTDGETIEWLLRMAEPSIIAATGNgiasvfspicasS 110 **********************************************6666555554441 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MVQQILQSFH YAVPVYFCAD SLGGAGSISA SHRGITVYGG EEVRNFYLNL NRRIRLPAIC 60 AARIFQLTRE LGNRTDGETI EWLLRMAEPS IIAATGNGIA SVFSPICASS NIPPPPPPPA 120 AAASNTTFIS PFSSGQLPLG CLDFSSPTVM YPCESSVAVP EAQGILLKNS EFPKPEQAFP 180 SFDFDLVANF DMEFPVNDMF QSVTVNDHEG EVQVQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 2e-22 | TCP family protein |