PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676410.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 525aa MW: 58886.7 Da PI: 6.4565

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27	1.1e-08	463	511	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 rWT+ E +l+++v + G g W+ I + + +Rt ++k++w+++l XP_021676410.1 463 RWTPSEVMKLIEGVSKCGVGKWTHIKKLLFsssSHRTSVNLKDKWRNLL 511 9**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MGTESKDALV DESASIFLYS HAEVDQDLSY LTTFEDEVTR LQQYLPEYKM DCFDGTIGFE 60 TFNSLKGFSI ESFSCAFDYD HINFDGDALD LYLAQEGEET KVEGNSNRLQ VTNKKVLLGD 120 FRTDSACKET LGAEPADEAP NLSCGSCEKT SLGNVALKSH SPHFQERDCH AEISNLSSSS 180 ETVLESARDR DSLLLDKMTA QDLCQVFSRI FGCETSVKDK QWLKHRIAVG LQNRGELVDS 240 LNLLESGETS KADEEKAVVL LNAALSGSAS DLTDTLENQL ISREKHVKRM RLASCNSLKS 300 VSSPVREVGF CSVNKSNTAD ALVTQKQTHW PTGICTKGLQ EQNSRYHHRK CRASYKNARD 360 EFLNVKTQKQ HCQKGIGTAQ LSCQEESLKG SCVQVPLDLP VQIGESTKDN HLVNDFDNCK 420 DNEVSVSDED FDRETSSADS QISEDDSVTR RKRARKRKQR HRRWTPSEVM KLIEGVSKCG 480 VGKWTHIKKL LFSSSSHRTS VNLKDKWRNL LKASNNEMQK KRKTS

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MGTESKDALV DESASIFLYS HAEVDQDLSY LTTFEDEVTR LQQYLPEYKM DCFDGTIGFE  60
TFNSLKGFSI ESFSCAFDYD HINFDGDALD LYLAQEGEET KVEGNSNRLQ VTNKKVLLGD  120
FRTDSACKET LGAEPADEAP NLSCGSCEKT SLGNVALKSH SPHFQERDCH AEISNLSSSS  180
ETVLESARDR DSLLLDKMTA QDLCQVFSRI FGCETSVKDK QWLKHRIAVG LQNRGELVDS  240
LNLLESGETS KADEEKAVVL LNAALSGSAS DLTDTLENQL ISREKHVKRM RLASCNSLKS  300
VSSPVREVGF CSVNKSNTAD ALVTQKQTHW PTGICTKGLQ EQNSRYHHRK CRASYKNARD  360
EFLNVKTQKQ HCQKGIGTAQ LSCQEESLKG SCVQVPLDLP VQIGESTKDN HLVNDFDNCK  420
DNEVSVSDED FDRETSSADS QISEDDSVTR RKRARKRKQR HRRWTPSEVM KLIEGVSKCG  480
VGKWTHIKKL LFSSSSHRTS VNLKDKWRNL LKASNNEMQK KRKTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	451	459	RKRARKRKQ
2	452	460	RKRARKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17460.1	1e-18	MYB_related family protein