PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676368.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 349aa MW: 38190.2 Da PI: 8.4648

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	6.9e-25	87	131	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_021676368.1 87 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 131 79****************************************986 PP
2	QLQ	63.8	4.4e-22	25	61	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l++Ky++a++PvPp+L+++iqk XP_021676368.1 25 SPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQK 61 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MNSGGVGGVG GVTGGMGTGA LAMRSPFTVS QWQELEHQAL IFKYMVAGLP VPPDLVLPIQ 60 KSFESISHRF FHHPTVGYCS FYGKKVDPEP GRCRRTDGKK WRCSKDAYPD SKYCERHMHR 120 GRNRSRKPVE SQTMTQSSST VTSLTVTGSS SGTGSFQNLP LHTFGNLQGT GSATNQSHYN 180 MDSIPYGIPS KDYRYGQGLK SEVGEHSFIS EASGSNRSLQ IDSQLDSAWP LMQSRVSSFA 240 TSKSADNSML QNDYPQHSFF DGAFTTGEPG KQGGQSLRPF FDEWPKTRDS WSGFEDDRSN 300 PTSFSTTRLS ISTPMASSDL STPSSRSPHD NRESMSRIDG AVAECPGKL

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MNSGGVGGVG GVTGGMGTGA LAMRSPFTVS QWQELEHQAL IFKYMVAGLP VPPDLVLPIQ  60
KSFESISHRF FHHPTVGYCS FYGKKVDPEP GRCRRTDGKK WRCSKDAYPD SKYCERHMHR  120
GRNRSRKPVE SQTMTQSSST VTSLTVTGSS SGTGSFQNLP LHTFGNLQGT GSATNQSHYN  180
MDSIPYGIPS KDYRYGQGLK SEVGEHSFIS EASGSNRSLQ IDSQLDSAWP LMQSRVSSFA  240
TSKSADNSML QNDYPQHSFF DGAFTTGEPG KQGGQSLRPF FDEWPKTRDS WSGFEDDRSN  300
PTSFSTTRLS ISTPMASSDL STPSSRSPHD NRESMSRIDG AVAECPGKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-46	GRF family protein