PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021676361.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 295aa    MW: 32234.2 Da    PI: 9.5208
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021676361.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH44.91.9e-14138164127
                     --S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                     yktelCr + ++G+C+yG++C+FaHg+
  XP_021676361.1 138 YKTELCRSWEEFGQCRYGSKCQFAHGK 164
                     9************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MDALHSSKKI SKLNTINGSV SPINTRFNAD STLIRYLRGG SPITSSPCNA KNDAFSSQEF  60
SSSRSSFGRS LSPLSSIENV MSTPVYGTPV KVVDHDVLVM DGILVESVSG GRVSRSLASD  120
SGDSSSNSSS SSPGIRVYKT ELCRSWEEFG QCRYGSKCQF AHGKEELRPT CFPMKSKAET  180
HAFKSHTAAS YSFGQKSRFL MAEGAVAASH SKPEYRNRSP NIASSSITLA QRIKPEIHNK  240
KPQDWSPLDD GIKVALPGDV DYSLSRKDVD AYIHRILHGP RTGKRLPVFT EFCLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.12e-09C3H family protein