PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676158.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 981aa MW: 108526 Da PI: 6.3369

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.3	8.1e-42	158	235	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_021676158.1 158 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNP 235 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 981 aa Download sequence
MEARFGVESE AQAHHFYGTG ATEMRAVGKR SLEWDLNDWK WDGDLFIASP LNPVPSGGMG 60 RQFFPVATGI PVNGNSSNSS SSCSDEVNLV IEKGRRELEK RRRVIVIEDD NLDGAEVGSL 120 SLKLGGQGYP ISEKEMRSWE GNSGKRTKLA GGSMSRAVCQ VEDCGADLSN AKDYHRRHKV 180 CEMHSKASKA LVGNVMQRFC QQCSRFHVLQ EFDEGKRSCR RRLAGHNKRR RKTNPEAAGN 240 GNSLNDDQTS SYLLISLLRI LTNMHSNRSD QVTDQDLLSH LLRSLASHAI EHGGRNISGL 300 LQEPRDLLND ANSEQVGRAH GANGANMQTS SSVKPSIPSN YPAYSEVRDS TAGQIKMNNF 360 DLNDIYVDSD DGAEDIERSP VATNIGTSSL DCPSWVQQDS HQSSPPQTSG NSDSVSAQSP 420 SSSSGDTQSR TDRIIFKLFG KEPNEFPLVL RAQILGWLSH SPTDIESYIR PGCVILTIYL 480 RQAESTWEEL CCNLGSSLSR LLDVSDDAFW RTGWVYIKVQ HQVAFVCNGQ VVVDTSLSLT 540 SNNYSKILSV KPIAISASER AQFVVKGINL SWPTTRLLCA VEGKYVFQED TQELMDGVDN 600 LKGYEELQCV SFCCSIPTVS GRGFIEIEDH GFSSNYFPFI VAEEDVCSEI RMLEGVLEFA 660 ETDADVGDTR KMVAQDQAME FIHEIGWLLH RGQLKSRLGH LDPYTDLFPL KRFKWLMEFS 720 MDHEWCAVVK KLLNILLKGV VGTGEHSSLN LALSEMGLLH RAVRKNSRSL VELLLRYVPE 780 KSVPENKSLI GGSHESNLFR PDATGPAGLT PLHIAAGKDG SEDVLDALTD DPGMVGIEAW 840 KSARDSTGFT PEDYARLRGH YLYIHLVKKK INKGPPLGHV VLDIPGTPAD CSINQKQNEG 900 VTTSFEIGQT AKRPIQGPCK LCHQKLDYGT AGRSLLYRPA MLSMVAIAAV CVCVALLFKS 960 CPEVVYVFRP FRWELLDYGP Y

Sequence ? help Back to Top

Protein Sequence Length: 981 aa Download sequence

MEARFGVESE AQAHHFYGTG ATEMRAVGKR SLEWDLNDWK WDGDLFIASP LNPVPSGGMG  60
RQFFPVATGI PVNGNSSNSS SSCSDEVNLV IEKGRRELEK RRRVIVIEDD NLDGAEVGSL  120
SLKLGGQGYP ISEKEMRSWE GNSGKRTKLA GGSMSRAVCQ VEDCGADLSN AKDYHRRHKV  180
CEMHSKASKA LVGNVMQRFC QQCSRFHVLQ EFDEGKRSCR RRLAGHNKRR RKTNPEAAGN  240
GNSLNDDQTS SYLLISLLRI LTNMHSNRSD QVTDQDLLSH LLRSLASHAI EHGGRNISGL  300
LQEPRDLLND ANSEQVGRAH GANGANMQTS SSVKPSIPSN YPAYSEVRDS TAGQIKMNNF  360
DLNDIYVDSD DGAEDIERSP VATNIGTSSL DCPSWVQQDS HQSSPPQTSG NSDSVSAQSP  420
SSSSGDTQSR TDRIIFKLFG KEPNEFPLVL RAQILGWLSH SPTDIESYIR PGCVILTIYL  480
RQAESTWEEL CCNLGSSLSR LLDVSDDAFW RTGWVYIKVQ HQVAFVCNGQ VVVDTSLSLT  540
SNNYSKILSV KPIAISASER AQFVVKGINL SWPTTRLLCA VEGKYVFQED TQELMDGVDN  600
LKGYEELQCV SFCCSIPTVS GRGFIEIEDH GFSSNYFPFI VAEEDVCSEI RMLEGVLEFA  660
ETDADVGDTR KMVAQDQAME FIHEIGWLLH RGQLKSRLGH LDPYTDLFPL KRFKWLMEFS  720
MDHEWCAVVK KLLNILLKGV VGTGEHSSLN LALSEMGLLH RAVRKNSRSL VELLLRYVPE  780
KSVPENKSLI GGSHESNLFR PDATGPAGLT PLHIAAGKDG SEDVLDALTD DPGMVGIEAW  840
KSARDSTGFT PEDYARLRGH YLYIHLVKKK INKGPPLGHV VLDIPGTPAD CSINQKQNEG  900
VTTSFEIGQT AKRPIQGPCK LCHQKLDYGT AGRSLLYRPA MLSMVAIAAV CVCVALLFKS  960
CPEVVYVFRP FRWELLDYGP Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	104	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein